Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 AL080243.2-201ENST00000418783 582 ntBASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 AC009477.1-201ENST00000452936 217 ntBASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 MIR4321-201ENST00000592276 80 ntBASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB1BQ9H0U4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 KRT8P12-202ENST00000472924 1397 ntBASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 MIR661-201ENST00000384842 89 ntBASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 AC015922.1-201ENST00000421102 1152 ntBASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 AC078925.2-201ENST00000624013 1973 ntBASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB1BQ9H0U4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB1BQ9H0U4 SPDYE17-201ENST00000412399 783 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms