Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 AC129492.6-201ENST00000611383 1305 ntBASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 AC004790.2-201ENST00000623588 572 ntBASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHRDL1Q9BU40 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 AL353732.1-201ENST00000569618 1459 ntBASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 PAUPAR-201ENST00000630360 2965 ntBASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 MRPL20P1-201ENST00000400819 433 ntBASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 OR7E47P-204ENST00000575924 449 ntBASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 CYP2A7P1-201ENST00000595391 815 ntBASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 AL121894.2-201ENST00000602977 491 ntBASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 AL512652.2-201ENST00000625156 1716 ntBASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHRDL1Q9BU40 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms