Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 MRPL20P1-201ENST00000400819 433 ntBASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 HNRNPDP1-201ENST00000439535 754 ntBASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 RNPS1P1-201ENST00000507437 918 ntBASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 AC008735.5-201ENST00000623544 497 ntBASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 AC004790.2-201ENST00000623588 572 ntBASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 TP73-AS1-207ENST00000624167 988 ntBASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 PGM5P2-202ENST00000637225 1043 ntBASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 AC136621.1-201ENST00000624017 2304 ntBASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 RNU1-129P-201ENST00000384064 167 ntBASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 MIR1224-201ENST00000408193 85 ntBASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 U1.21-201ENST00000580816 167 ntBASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 AC092919.2-201ENST00000623631 1645 ntBASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HDHD3Q9BSH5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HDHD3Q9BSH5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms