Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN18Q99952 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PTPN18Q99952 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
PTPN18Q99952 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPN18Q99952 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN18Q99952 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN18Q99952 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN18Q99952 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN18Q99952 AC006001.1-201ENST00000325130 474 ntBASIC18.34■□□□□ 0.53
PTPN18Q99952 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PTPN18Q99952 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN18Q99952 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN18Q99952 AC007969.1-201ENST00000433675 447 ntBASIC18.34■□□□□ 0.53
PTPN18Q99952 AKR7A2P1-201ENST00000460134 915 ntBASIC18.34■□□□□ 0.53
PTPN18Q99952 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.34■□□□□ 0.53
PTPN18Q99952 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.34■□□□□ 0.53
PTPN18Q99952 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPN18Q99952 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN18Q99952 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN18Q99952 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PTPN18Q99952 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN18Q99952 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN18Q99952 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPN18Q99952 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN18Q99952 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PTPN18Q99952 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN18Q99952 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN18Q99952 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPN18Q99952 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPN18Q99952 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN18Q99952 NEFHP1-201ENST00000412845 2629 ntBASIC18.34■□□□□ 0.53
PTPN18Q99952 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PTPN18Q99952 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PTPN18Q99952 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.33■□□□□ 0.53
PTPN18Q99952 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PTPN18Q99952 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN18Q99952 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PTPN18Q99952 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN18Q99952 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.33■□□□□ 0.53
PTPN18Q99952 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN18Q99952 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN18Q99952 ACKR1-201ENST00000368121 1240 ntBASIC18.33■□□□□ 0.52
PTPN18Q99952 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
PTPN18Q99952 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.33■□□□□ 0.52
PTPN18Q99952 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPN18Q99952 C2orf27AP3-201ENST00000434123 579 ntBASIC18.33■□□□□ 0.52
PTPN18Q99952 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.33■□□□□ 0.52
PTPN18Q99952 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.33■□□□□ 0.52
PTPN18Q99952 ARTN-209ENST00000479128 471 ntTSL 3 BASIC18.33■□□□□ 0.52
PTPN18Q99952 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN18Q99952 AC025279.2-201ENST00000569730 653 ntBASIC18.33■□□□□ 0.52
PTPN18Q99952 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPN18Q99952 AL354718.3-201ENST00000616414 581 ntBASIC18.33■□□□□ 0.52
PTPN18Q99952 CR382287.1-201ENST00000623954 586 ntBASIC18.33■□□□□ 0.52
PTPN18Q99952 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
PTPN18Q99952 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
PTPN18Q99952 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPN18Q99952 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN18Q99952 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN18Q99952 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PTPN18Q99952 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.33■□□□□ 0.52
PTPN18Q99952 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN18Q99952 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.32■□□□□ 0.52
PTPN18Q99952 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.32■□□□□ 0.52
PTPN18Q99952 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPN18Q99952 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPN18Q99952 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN18Q99952 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PTPN18Q99952 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PTPN18Q99952 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.32■□□□□ 0.52
PTPN18Q99952 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPN18Q99952 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.32■□□□□ 0.52
PTPN18Q99952 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.32■□□□□ 0.52
PTPN18Q99952 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.32■□□□□ 0.52
PTPN18Q99952 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
PTPN18Q99952 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PTPN18Q99952 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPN18Q99952 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PTPN18Q99952 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN18Q99952 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPN18Q99952 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN18Q99952 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN18Q99952 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN18Q99952 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms