Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC10.83□□□□□ -0.68
LITAFQ99732 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LITAFQ99732 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC10.82□□□□□ -0.68
LITAFQ99732 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 SLC22A20-204ENST00000530038 1673 ntBASIC10.82□□□□□ -0.68
LITAFQ99732 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
LITAFQ99732 AC079781.5-202ENST00000641784 3743 ntBASIC10.82□□□□□ -0.68
LITAFQ99732 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 BEND3P1-201ENST00000421591 1944 ntBASIC10.82□□□□□ -0.68
LITAFQ99732 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC10.82□□□□□ -0.68
LITAFQ99732 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC10.82□□□□□ -0.68
LITAFQ99732 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
LITAFQ99732 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC10.82□□□□□ -0.68
LITAFQ99732 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
LITAFQ99732 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
LITAFQ99732 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC10.82□□□□□ -0.68
LITAFQ99732 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC10.82□□□□□ -0.68
LITAFQ99732 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC10.82□□□□□ -0.68
LITAFQ99732 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 HAUS4P1-201ENST00000406739 1145 ntBASIC10.82□□□□□ -0.68
LITAFQ99732 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC10.82□□□□□ -0.68
LITAFQ99732 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC10.82□□□□□ -0.68
LITAFQ99732 DENND3-207ENST00000518347 850 ntTSL 2 BASIC10.82□□□□□ -0.68
LITAFQ99732 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC10.82□□□□□ -0.68
LITAFQ99732 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC10.82□□□□□ -0.68
LITAFQ99732 AL355075.4-201ENST00000554988 638 ntBASIC10.82□□□□□ -0.68
LITAFQ99732 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
LITAFQ99732 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC10.82□□□□□ -0.68
LITAFQ99732 SNX21-213ENST00000614929 587 ntTSL 5 BASIC10.82□□□□□ -0.68
LITAFQ99732 REXO1L3P-201ENST00000622202 1288 ntBASIC10.82□□□□□ -0.68
LITAFQ99732 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 U82695.1-201ENST00000635752 1889 ntBASIC10.82□□□□□ -0.68
LITAFQ99732 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
LITAFQ99732 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
LITAFQ99732 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC10.82□□□□□ -0.68
LITAFQ99732 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC10.82□□□□□ -0.68
LITAFQ99732 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC10.82□□□□□ -0.68
LITAFQ99732 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC10.82□□□□□ -0.68
LITAFQ99732 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LITAFQ99732 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LITAFQ99732 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LITAFQ99732 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC10.81□□□□□ -0.68
LITAFQ99732 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LITAFQ99732 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC10.81□□□□□ -0.68
LITAFQ99732 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC10.81□□□□□ -0.68
LITAFQ99732 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LITAFQ99732 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC10.81□□□□□ -0.68
LITAFQ99732 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
LITAFQ99732 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC10.81□□□□□ -0.68
LITAFQ99732 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LITAFQ99732 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LITAFQ99732 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms