Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
LYSTQ99698 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC11.04□□□□□ -0.64
LYSTQ99698 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LYSTQ99698 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 AC106760.1-201ENST00000508690 800 ntBASIC11.04□□□□□ -0.64
LYSTQ99698 LARP4-220ENST00000615080 856 ntTSL 5 BASIC11.04□□□□□ -0.64
LYSTQ99698 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.04□□□□□ -0.64
LYSTQ99698 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC11.04□□□□□ -0.64
LYSTQ99698 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
LYSTQ99698 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC11.04□□□□□ -0.64
LYSTQ99698 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.04□□□□□ -0.64
LYSTQ99698 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC11.04□□□□□ -0.64
LYSTQ99698 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LYSTQ99698 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.04□□□□□ -0.64
LYSTQ99698 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.04□□□□□ -0.64
LYSTQ99698 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC11.04□□□□□ -0.64
LYSTQ99698 BRI3BPP1-201ENST00000594224 787 ntBASIC11.04□□□□□ -0.64
LYSTQ99698 AC105020.1-201ENST00000435356 2205 ntBASIC11.04□□□□□ -0.64
LYSTQ99698 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LYSTQ99698 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.04□□□□□ -0.64
LYSTQ99698 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC11.04□□□□□ -0.64
LYSTQ99698 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LYSTQ99698 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC11.03□□□□□ -0.64
LYSTQ99698 CYP4F24P-201ENST00000586049 1580 ntBASIC11.03□□□□□ -0.64
LYSTQ99698 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC11.03□□□□□ -0.64
LYSTQ99698 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC11.03□□□□□ -0.64
LYSTQ99698 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 NKAIN1P1-201ENST00000435754 582 ntBASIC11.03□□□□□ -0.64
LYSTQ99698 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC11.03□□□□□ -0.64
LYSTQ99698 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LYSTQ99698 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC11.03□□□□□ -0.64
LYSTQ99698 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
LYSTQ99698 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LYSTQ99698 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LYSTQ99698 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
LYSTQ99698 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC11.03□□□□□ -0.64
LYSTQ99698 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.03□□□□□ -0.64
LYSTQ99698 FNTAP2-201ENST00000430308 634 ntBASIC11.03□□□□□ -0.64
LYSTQ99698 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LYSTQ99698 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC11.03□□□□□ -0.64
LYSTQ99698 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
LYSTQ99698 MIR3907-201ENST00000579424 151 ntBASIC11.03□□□□□ -0.64
LYSTQ99698 CES3-203ENST00000543856 3178 ntTSL 2 BASIC11.03□□□□□ -0.64
LYSTQ99698 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LYSTQ99698 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC11.03□□□□□ -0.64
LYSTQ99698 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.03□□□□□ -0.64
LYSTQ99698 INTS4P2-202ENST00000614726 2019 ntBASIC11.03□□□□□ -0.64
LYSTQ99698 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
LYSTQ99698 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
LYSTQ99698 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.03□□□□□ -0.64
LYSTQ99698 RN7SL181P-201ENST00000462921 277 ntBASIC11.03□□□□□ -0.64
LYSTQ99698 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.03□□□□□ -0.64
LYSTQ99698 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC11.03□□□□□ -0.64
LYSTQ99698 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC11.03□□□□□ -0.64
LYSTQ99698 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC11.03□□□□□ -0.64
LYSTQ99698 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYSTQ99698 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.03□□□□□ -0.64
LYSTQ99698 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms