Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 AL353593.2-201ENST00000602529 1483 ntBASIC12.37□□□□□ -0.43
AP1S3Q96PC3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 AC138035.3-201ENST00000622706 2791 ntBASIC12.36□□□□□ -0.43
AP1S3Q96PC3 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 MTHFR-217ENST00000641820 1569 ntBASIC12.36□□□□□ -0.43
AP1S3Q96PC3 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 AL021920.2-201ENST00000624828 1351 ntBASIC12.36□□□□□ -0.43
AP1S3Q96PC3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 AC010203.1-204ENST00000548782 407 ntBASIC12.36□□□□□ -0.43
AP1S3Q96PC3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 AL138831.2-201ENST00000606564 490 ntBASIC12.36□□□□□ -0.43
AP1S3Q96PC3 AC139887.4-201ENST00000607877 719 ntBASIC12.36□□□□□ -0.43
AP1S3Q96PC3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
AP1S3Q96PC3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 AC006538.1-201ENST00000567905 1585 ntBASIC12.35□□□□□ -0.43
AP1S3Q96PC3 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms