Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.15■□□□□ 0.34
CASD1Q96PB1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
CASD1Q96PB1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.15■□□□□ 0.34
CASD1Q96PB1 AC133539.2-201ENST00000604757 467 ntBASIC17.15■□□□□ 0.34
CASD1Q96PB1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASD1Q96PB1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASD1Q96PB1 AC012313.1-201ENST00000593393 3059 ntBASIC17.15■□□□□ 0.34
CASD1Q96PB1 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASD1Q96PB1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CASD1Q96PB1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASD1Q96PB1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASD1Q96PB1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASD1Q96PB1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CASD1Q96PB1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASD1Q96PB1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.14■□□□□ 0.34
CASD1Q96PB1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASD1Q96PB1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASD1Q96PB1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASD1Q96PB1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CASD1Q96PB1 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 KRT223P-202ENST00000449164 1292 ntBASIC17.14■□□□□ 0.33
CASD1Q96PB1 AC022494.1-201ENST00000466044 728 ntBASIC17.14■□□□□ 0.33
CASD1Q96PB1 FAM86LP-201ENST00000478302 853 ntBASIC17.14■□□□□ 0.33
CASD1Q96PB1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 BRI3BPP1-201ENST00000594224 787 ntBASIC17.14■□□□□ 0.33
CASD1Q96PB1 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASD1Q96PB1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASD1Q96PB1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASD1Q96PB1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASD1Q96PB1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASD1Q96PB1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CASD1Q96PB1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.14■□□□□ 0.33
CASD1Q96PB1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASD1Q96PB1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 ALOX12P2-203ENST00000570921 1945 ntBASIC17.13■□□□□ 0.33
CASD1Q96PB1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.13■□□□□ 0.33
CASD1Q96PB1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CASD1Q96PB1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.13■□□□□ 0.33
CASD1Q96PB1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.13■□□□□ 0.33
CASD1Q96PB1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.13■□□□□ 0.33
CASD1Q96PB1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.13■□□□□ 0.33
CASD1Q96PB1 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 TOMM22P5-201ENST00000416399 439 ntBASIC17.13■□□□□ 0.33
CASD1Q96PB1 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CASD1Q96PB1 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 SLC25A47P1-201ENST00000531577 414 ntBASIC17.13■□□□□ 0.33
CASD1Q96PB1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.13■□□□□ 0.33
CASD1Q96PB1 AL359711.2-201ENST00000563105 872 ntBASIC17.13■□□□□ 0.33
CASD1Q96PB1 AC133552.6-201ENST00000613406 534 ntBASIC17.13■□□□□ 0.33
CASD1Q96PB1 AL033527.4-201ENST00000641026 673 ntBASIC17.13■□□□□ 0.33
CASD1Q96PB1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.13■□□□□ 0.33
CASD1Q96PB1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.13■□□□□ 0.33
CASD1Q96PB1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.13■□□□□ 0.33
CASD1Q96PB1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASD1Q96PB1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms