Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM43Q96BQ3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM43Q96BQ3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM43Q96BQ3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM43Q96BQ3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM43Q96BQ3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM43Q96BQ3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRIM43Q96BQ3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM43Q96BQ3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM43Q96BQ3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM43Q96BQ3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM43Q96BQ3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRIM43Q96BQ3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM43Q96BQ3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 REXO1L8P-201ENST00000604378 1897 ntBASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 AC105129.2-201ENST00000559536 390 ntBASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM43Q96BQ3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM43Q96BQ3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.39■□□□□ 0.38
TRIM43Q96BQ3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM43Q96BQ3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 BTBD6P1-201ENST00000412176 1267 ntBASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 AC005077.2-201ENST00000449786 690 ntBASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 AC005695.3-201ENST00000614522 232 ntBASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM43Q96BQ3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM43Q96BQ3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms