Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 CICP6-201ENST00000457191 2729 ntBASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 PCDH8P1-201ENST00000428983 2773 ntBASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SH3KBP1Q96B97 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.14■□□□□ 0.18
SH3KBP1Q96B97 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SH3KBP1Q96B97 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SH3KBP1Q96B97 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SH3KBP1Q96B97 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SH3KBP1Q96B97 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
SH3KBP1Q96B97 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 AL662844.4-201ENST00000606367 2838 ntBASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 HLA-A-202ENST00000376806 1854 ntBASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 DOC2GP-204ENST00000639052 2548 ntBASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SH3KBP1Q96B97 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 MIR346-201ENST00000362234 95 ntBASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 MIR770-201ENST00000390219 98 ntBASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 FAM58DP-201ENST00000428076 619 ntBASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 AC069262.1-201ENST00000539058 672 ntBASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 AP000842.3-202ENST00000569238 1080 ntBASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SH3KBP1Q96B97 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms