Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.27□□□□□ -0.12
SPTSSAQ969W0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.27□□□□□ -0.12
SPTSSAQ969W0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SPTSSAQ969W0 AC024909.3-201ENST00000611513 2257 ntBASIC14.27□□□□□ -0.12
SPTSSAQ969W0 AL603832.2-201ENST00000566195 2125 ntBASIC14.27□□□□□ -0.12
SPTSSAQ969W0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPTSSAQ969W0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPTSSAQ969W0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPTSSAQ969W0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
SPTSSAQ969W0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SPTSSAQ969W0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPTSSAQ969W0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
SPTSSAQ969W0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SPTSSAQ969W0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPTSSAQ969W0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPTSSAQ969W0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SPTSSAQ969W0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SPTSSAQ969W0 PMS2P7-201ENST00000506558 1336 ntBASIC14.27□□□□□ -0.12
SPTSSAQ969W0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 AC106730.1-201ENST00000566722 1090 ntBASIC14.27□□□□□ -0.13
SPTSSAQ969W0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.27□□□□□ -0.13
SPTSSAQ969W0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 AC026396.1-201ENST00000419388 421 ntBASIC14.26□□□□□ -0.13
SPTSSAQ969W0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 AC140113.2-201ENST00000604370 208 ntBASIC14.26□□□□□ -0.13
SPTSSAQ969W0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSAQ969W0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SPTSSAQ969W0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms