Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CNOT9Q92600 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.03■□□□□ -0
CNOT9Q92600 AC023274.1-201ENST00000418278 595 ntBASIC15.03■□□□□ -0
CNOT9Q92600 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.03■□□□□ -0
CNOT9Q92600 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CNOT9Q92600 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CNOT9Q92600 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CNOT9Q92600 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.03■□□□□ -0
CNOT9Q92600 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.03■□□□□ -0
CNOT9Q92600 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.03■□□□□ -0
CNOT9Q92600 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNOT9Q92600 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
CNOT9Q92600 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.02■□□□□ -0
CNOT9Q92600 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CNOT9Q92600 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.02■□□□□ -0
CNOT9Q92600 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 WASH6P-202ENST00000359512 1437 ntBASIC15.02■□□□□ -0
CNOT9Q92600 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.02■□□□□ -0
CNOT9Q92600 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
CNOT9Q92600 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.02■□□□□ -0
CNOT9Q92600 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.02■□□□□ -0
CNOT9Q92600 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNOT9Q92600 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.02■□□□□ -0
CNOT9Q92600 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.02■□□□□ -0
CNOT9Q92600 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.02■□□□□ -0
CNOT9Q92600 AL161645.1-201ENST00000622716 1255 ntBASIC15.02■□□□□ -0
CNOT9Q92600 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.02□□□□□ -0.01
CNOT9Q92600 AC073439.1-201ENST00000624121 1774 ntBASIC15.02□□□□□ -0.01
CNOT9Q92600 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT9Q92600 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.02□□□□□ -0.01
CNOT9Q92600 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT9Q92600 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT9Q92600 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT9Q92600 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT9Q92600 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.02□□□□□ -0.01
CNOT9Q92600 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.02□□□□□ -0.01
CNOT9Q92600 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT9Q92600 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT9Q92600 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT9Q92600 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT9Q92600 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CNOT9Q92600 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CNOT9Q92600 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CNOT9Q92600 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.01□□□□□ -0.01
CNOT9Q92600 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT9Q92600 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CNOT9Q92600 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT9Q92600 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CNOT9Q92600 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CNOT9Q92600 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CNOT9Q92600 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT9Q92600 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CNOT9Q92600 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT9Q92600 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.01□□□□□ -0.01
CNOT9Q92600 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CNOT9Q92600 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT9Q92600 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT9Q92600 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.01□□□□□ -0.01
CNOT9Q92600 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT9Q92600 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT9Q92600 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT9Q92600 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT9Q92600 AC002056.1-201ENST00000395613 760 ntBASIC15.01□□□□□ -0.01
CNOT9Q92600 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.01□□□□□ -0.01
CNOT9Q92600 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT9Q92600 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.01□□□□□ -0.01
CNOT9Q92600 AC099522.2-201ENST00000607001 744 ntBASIC15.01□□□□□ -0.01
CNOT9Q92600 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT9Q92600 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CNOT9Q92600 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.01□□□□□ -0.01
CNOT9Q92600 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms