Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 LINC00552-201ENST00000625151 2579 ntBASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 NSUN5P1-202ENST00000421140 1535 ntBASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 NSUN5P2-203ENST00000457352 1529 ntBASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 HAUS4P1-201ENST00000406739 1145 ntBASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 Z69720.1-201ENST00000601483 472 ntBASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 AL139424.1-201ENST00000607572 797 ntBASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 AF228730.7-201ENST00000641842 219 ntBASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CKAP2Q8WWK9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 AC011477.6-201ENST00000604980 1927 ntBASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 AC104076.2-201ENST00000448912 469 ntBASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 DUX4L26-201ENST00000489078 1255 ntBASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 SLC25A6P2-201ENST00000497974 877 ntBASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CKAP2Q8WWK9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms