Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 FDX1P1-201ENST00000449115 551 ntBASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 AL365203.3-201ENST00000609742 2057 ntBASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 AL139384.1-201ENST00000612143 3047 ntBASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAF3IP1Q8TDR0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 AC016027.1-202ENST00000607927 1699 ntBASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 AC092474.2-201ENST00000424288 719 ntBASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 KRT18P2-201ENST00000447938 1258 ntBASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 AC068137.2-201ENST00000605408 478 ntBASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 BX640515.1-201ENST00000617215 977 ntBASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 PAUPAR-201ENST00000630360 2965 ntBASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 AC092919.2-201ENST00000623631 1645 ntBASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
TRAF3IP1Q8TDR0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms