Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 TEX28P1-201ENST00000613479 1221 ntBASIC22.57■■□□□ 1.2
TMC1Q8TDI8 TEX28P2-201ENST00000617764 1221 ntBASIC22.57■■□□□ 1.2
TMC1Q8TDI8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 ME2P1-201ENST00000426028 1970 ntBASIC22.57■■□□□ 1.2
TMC1Q8TDI8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 AC005622.1-201ENST00000636801 1703 ntBASIC22.57■■□□□ 1.2
TMC1Q8TDI8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMC1Q8TDI8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 GGT3P-204ENST00000453783 1664 ntBASIC22.56■■□□□ 1.2
TMC1Q8TDI8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 AC022144.1-201ENST00000602255 1580 ntBASIC22.56■■□□□ 1.2
TMC1Q8TDI8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 FAM207CP-201ENST00000443486 507 ntBASIC22.56■■□□□ 1.2
TMC1Q8TDI8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
TMC1Q8TDI8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMC1Q8TDI8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC22.54■■□□□ 1.2
TMC1Q8TDI8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 AL079307.3-201ENST00000556114 283 ntBASIC22.54■■□□□ 1.2
TMC1Q8TDI8 AC061975.2-201ENST00000581722 295 ntBASIC22.54■■□□□ 1.2
TMC1Q8TDI8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TMC1Q8TDI8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TMC1Q8TDI8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms