Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 SPDYE7P-202ENST00000420373 878 ntBASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 AC015911.4-201ENST00000588022 1070 ntBASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.67□□□□□ -0.06
FNDC9Q8TBE3 TUBB3P1-201ENST00000405796 1332 ntBASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 AP3S2-216ENST00000617003 1561 ntBASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 AC093724.1-201ENST00000448659 1027 ntBASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 AC067863.1-201ENST00000494933 530 ntBASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 RARRES2P9-201ENST00000565168 469 ntBASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 SPTSSB-204ENST00000617024 1292 ntBASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
FNDC9Q8TBE3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 HLA-H-201ENST00000383620 1096 ntBASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 HMGN1P19-201ENST00000436976 333 ntBASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 AC098859.1-201ENST00000502915 1238 ntBASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
FNDC9Q8TBE3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms