Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 ACTG1P2-201ENST00000415776 1125 ntBASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 ACTG1P11-201ENST00000425411 1125 ntBASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 AC104784.1-201ENST00000473096 294 ntBASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 COX5BP1-201ENST00000507622 393 ntBASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 MPV17-205ENST00000402310 906 ntTSL 5 BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 AL354877.1-201ENST00000424412 413 ntBASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 AL133466.1-201ENST00000447582 150 ntBASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 AC024681.1-201ENST00000521917 487 ntBASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC21.15■□□□□ 0.98
COL22A1Q8NFW1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COL22A1Q8NFW1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL22A1Q8NFW1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL22A1Q8NFW1 AP001282.1-201ENST00000531301 1499 ntBASIC21.14■□□□□ 0.97
COL22A1Q8NFW1 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL22A1Q8NFW1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.14■□□□□ 0.97
COL22A1Q8NFW1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
COL22A1Q8NFW1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.14■□□□□ 0.97
COL22A1Q8NFW1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL22A1Q8NFW1 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL22A1Q8NFW1 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL22A1Q8NFW1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.14■□□□□ 0.97
COL22A1Q8NFW1 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
COL22A1Q8NFW1 RN7SL48P-201ENST00000579283 293 ntBASIC21.14■□□□□ 0.97
COL22A1Q8NFW1 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC21.14■□□□□ 0.97
COL22A1Q8NFW1 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
COL22A1Q8NFW1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL22A1Q8NFW1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 NDUFAB1P1-201ENST00000404262 460 ntBASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 AL627389.1-201ENST00000413508 1182 ntBASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 RNF41-210ENST00000552244 716 ntTSL 3 BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 MIR4750-201ENST00000584564 56 ntBASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 AC007663.3-201ENST00000609632 465 ntBASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.13■□□□□ 0.97
COL22A1Q8NFW1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 POU5F1P6-201ENST00000466990 990 ntBASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 ATP6V0CP2-201ENST00000469409 207 ntBASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 AC073413.1-201ENST00000603927 732 ntBASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.12■□□□□ 0.97
COL22A1Q8NFW1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 SNX21-203ENST00000372541 771 ntTSL 2 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 NCK2-206ENST00000522586 490 ntTSL 5 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms