Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 AC126177.1-201ENST00000547829 2218 ntBASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL1Q8N7R7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 AL592424.1-201ENST00000563624 1536 ntBASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 RNPS1P1-201ENST00000507437 918 ntBASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 IGHV3-65-201ENST00000523210 341 ntBASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 CLEC4GP1-201ENST00000596555 870 ntBASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL1Q8N7R7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 MRPL20P1-201ENST00000400819 433 ntBASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 AL356488.2-201ENST00000602755 427 ntBASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 AC012313.10-201ENST00000623509 926 ntBASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 AC008735.5-201ENST00000623544 497 ntBASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNYL1Q8N7R7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.09■□□□□ 0.17
CCNYL1Q8N7R7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCNYL1Q8N7R7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNYL1Q8N7R7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms