Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 PTPA-217ENST00000434095 870 ntTSL 2 BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 AP001505.2-201ENST00000616815 443 ntBASIC22.56■■□□□ 1.2
UBR1Q8IWV7 AC005915.1-201ENST00000624912 2018 ntBASIC22.56■■□□□ 1.2
UBR1Q8IWV7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBR1Q8IWV7 REXO1L1P-202ENST00000608646 1974 ntBASIC22.56■■□□□ 1.2
UBR1Q8IWV7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 RERG-205ENST00000537647 935 ntTSL 2 BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC22.55■■□□□ 1.2
UBR1Q8IWV7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UBR1Q8IWV7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UBR1Q8IWV7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UBR1Q8IWV7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC22.54■■□□□ 1.2
UBR1Q8IWV7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UBR1Q8IWV7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC22.54■■□□□ 1.2
UBR1Q8IWV7 AC104982.3-201ENST00000581995 514 ntBASIC22.54■■□□□ 1.2
UBR1Q8IWV7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC22.54■■□□□ 1.2
UBR1Q8IWV7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC22.54■■□□□ 1.2
UBR1Q8IWV7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
UBR1Q8IWV7 AC015818.8-201ENST00000587907 1519 ntBASIC22.54■■□□□ 1.2
UBR1Q8IWV7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBR1Q8IWV7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UBR1Q8IWV7 KRT8P35-201ENST00000483942 1338 ntBASIC22.54■■□□□ 1.2
UBR1Q8IWV7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBR1Q8IWV7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UBR1Q8IWV7 FNTAP2-201ENST00000430308 634 ntBASIC22.54■■□□□ 1.2
UBR1Q8IWV7 POM121L10P-201ENST00000436994 1285 ntBASIC22.54■■□□□ 1.2
UBR1Q8IWV7 AC253536.4-201ENST00000440539 267 ntBASIC22.54■■□□□ 1.2
UBR1Q8IWV7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UBR1Q8IWV7 U62317.3-201ENST00000608319 855 ntBASIC22.54■■□□□ 1.2
UBR1Q8IWV7 AL023775.1-201ENST00000454907 1746 ntBASIC22.54■■□□□ 1.2
UBR1Q8IWV7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC22.53■■□□□ 1.2
UBR1Q8IWV7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC22.53■■□□□ 1.2
UBR1Q8IWV7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBR1Q8IWV7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBR1Q8IWV7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBR1Q8IWV7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
UBR1Q8IWV7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
UBR1Q8IWV7 PGGT1BP2-201ENST00000398621 1028 ntBASIC22.53■■□□□ 1.2
UBR1Q8IWV7 AC016700.1-201ENST00000429424 312 ntBASIC22.53■■□□□ 1.2
UBR1Q8IWV7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC22.53■■□□□ 1.2
UBR1Q8IWV7 LDHBP1-201ENST00000455730 1119 ntBASIC22.53■■□□□ 1.2
UBR1Q8IWV7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC22.53■■□□□ 1.2
UBR1Q8IWV7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
UBR1Q8IWV7 AC138649.2-201ENST00000615886 705 ntBASIC22.53■■□□□ 1.2
UBR1Q8IWV7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
UBR1Q8IWV7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
UBR1Q8IWV7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
UBR1Q8IWV7 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 AP003171.2-201ENST00000528208 925 ntBASIC22.52■■□□□ 1.2
UBR1Q8IWV7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC22.52■■□□□ 1.2
UBR1Q8IWV7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms