Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC016027.1-202ENST00000607927 1699 ntBASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 AC092919.2-201ENST00000623631 1645 ntBASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 AC068587.6-202ENST00000641839 5619 ntBASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00346Q8IVM7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 KRT18P34-201ENST00000488218 1270 ntBASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 AC109635.5-201ENST00000533593 962 ntBASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 KRT19P2-202ENST00000557173 1012 ntBASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 AL078644.1-201ENST00000609881 752 ntBASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
LINC00346Q8IVM7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms