Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 SPDYE19P-201ENST00000338590 713 ntBASIC18.05■□□□□ 0.48
TRIM50Q86XT4 COX5BP8-201ENST00000416911 349 ntBASIC18.05■□□□□ 0.48
TRIM50Q86XT4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 MIR4321-201ENST00000592276 80 ntBASIC18.05■□□□□ 0.48
TRIM50Q86XT4 AL109936.8-201ENST00000641772 604 ntBASIC18.05■□□□□ 0.48
TRIM50Q86XT4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 BTBD7P1-201ENST00000447253 1453 ntBASIC18.05■□□□□ 0.48
TRIM50Q86XT4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM50Q86XT4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 CYP4F24P-201ENST00000586049 1580 ntBASIC18.04■□□□□ 0.48
TRIM50Q86XT4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 AL589987.1-201ENST00000453380 819 ntBASIC18.04■□□□□ 0.48
TRIM50Q86XT4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 AC027307.3-201ENST00000594262 1100 ntBASIC18.04■□□□□ 0.48
TRIM50Q86XT4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.04■□□□□ 0.48
TRIM50Q86XT4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM50Q86XT4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms