Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.73□□□□□ -0.21
RAI1Q7Z5J4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAI1Q7Z5J4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.73□□□□□ -0.21
RAI1Q7Z5J4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAI1Q7Z5J4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RAI1Q7Z5J4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAI1Q7Z5J4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.73□□□□□ -0.21
RAI1Q7Z5J4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.73□□□□□ -0.21
RAI1Q7Z5J4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RAI1Q7Z5J4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAI1Q7Z5J4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 AP005482.1-201ENST00000563722 1273 ntBASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 TMEM261P1-201ENST00000604899 340 ntBASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 AC234783.1-201ENST00000441761 496 ntBASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 KRT223P-202ENST00000449164 1292 ntBASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 AL158212.4-201ENST00000624062 1286 ntBASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAI1Q7Z5J4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 MIR658-201ENST00000385210 100 ntBASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 AC022494.1-201ENST00000466044 728 ntBASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 AC011495.1-201ENST00000498085 584 ntBASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RAI1Q7Z5J4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.71□□□□□ -0.22
RAI1Q7Z5J4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAI1Q7Z5J4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAI1Q7Z5J4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAI1Q7Z5J4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
RAI1Q7Z5J4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
RAI1Q7Z5J4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.71□□□□□ -0.22
RAI1Q7Z5J4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAI1Q7Z5J4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.71□□□□□ -0.22
RAI1Q7Z5J4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC13.71□□□□□ -0.22
RAI1Q7Z5J4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms