Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.36■□□□□ 0.21
LYSMD3Q7Z3D4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 GPS2P2-201ENST00000430745 888 ntBASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD3Q7Z3D4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 MTHFR-217ENST00000641820 1569 ntBASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD3Q7Z3D4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
LYSMD3Q7Z3D4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LYSMD3Q7Z3D4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.33■□□□□ 0.21
LYSMD3Q7Z3D4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.33■□□□□ 0.21
LYSMD3Q7Z3D4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.33■□□□□ 0.21
LYSMD3Q7Z3D4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LYSMD3Q7Z3D4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
LYSMD3Q7Z3D4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
LYSMD3Q7Z3D4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 RBPMS2P1-201ENST00000437762 623 ntBASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 METTL21AP1-201ENST00000438852 635 ntBASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD3Q7Z3D4 RNA5SP410-201ENST00000516285 106 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms