Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 AC129492.6-201ENST00000611383 1305 ntBASIC14.75□□□□□ -0.05
SHFQ7M4L6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.75□□□□□ -0.05
SHFQ7M4L6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.75□□□□□ -0.05
SHFQ7M4L6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 AC087641.1-201ENST00000557561 1021 ntBASIC14.75□□□□□ -0.05
SHFQ7M4L6 AC005412.3-201ENST00000580309 715 ntBASIC14.75□□□□□ -0.05
SHFQ7M4L6 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 AC006504.4-201ENST00000592118 1568 ntBASIC14.75□□□□□ -0.05
SHFQ7M4L6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
SHFQ7M4L6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHFQ7M4L6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.74□□□□□ -0.05
SHFQ7M4L6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.74□□□□□ -0.05
SHFQ7M4L6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.74□□□□□ -0.05
SHFQ7M4L6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.74□□□□□ -0.05
SHFQ7M4L6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.74□□□□□ -0.05
SHFQ7M4L6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 AC136621.1-201ENST00000624017 2304 ntBASIC14.74□□□□□ -0.05
SHFQ7M4L6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.74□□□□□ -0.05
SHFQ7M4L6 MIR1224-201ENST00000408193 85 ntBASIC14.74□□□□□ -0.05
SHFQ7M4L6 ELK2BP-201ENST00000415014 1224 ntBASIC14.74□□□□□ -0.05
SHFQ7M4L6 HCG4-201ENST00000418983 998 ntBASIC14.74□□□□□ -0.05
SHFQ7M4L6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.74□□□□□ -0.05
SHFQ7M4L6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.74□□□□□ -0.05
SHFQ7M4L6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.74□□□□□ -0.05
SHFQ7M4L6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.74□□□□□ -0.05
SHFQ7M4L6 AC021087.4-201ENST00000563761 564 ntBASIC14.74□□□□□ -0.05
SHFQ7M4L6 AC025062.2-201ENST00000605477 670 ntBASIC14.74□□□□□ -0.05
SHFQ7M4L6 AC107918.4-202ENST00000641623 219 ntBASIC14.74□□□□□ -0.05
SHFQ7M4L6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SHFQ7M4L6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
SHFQ7M4L6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms