Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 AL365209.1-201ENST00000624418 6473 ntBASIC16.42■□□□□ 0.22
RAPH1Q70E73 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAPH1Q70E73 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAPH1Q70E73 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAPH1Q70E73 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAPH1Q70E73 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAPH1Q70E73 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.42■□□□□ 0.22
RAPH1Q70E73 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAPH1Q70E73 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAPH1Q70E73 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAPH1Q70E73 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAPH1Q70E73 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAPH1Q70E73 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAPH1Q70E73 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAPH1Q70E73 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAPH1Q70E73 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 FAM197Y8-203ENST00000450145 560 ntBASIC16.41■□□□□ 0.22
RAPH1Q70E73 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAPH1Q70E73 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAPH1Q70E73 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAPH1Q70E73 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAPH1Q70E73 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAPH1Q70E73 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RAPH1Q70E73 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAPH1Q70E73 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAPH1Q70E73 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RAPH1Q70E73 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAPH1Q70E73 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAPH1Q70E73 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAPH1Q70E73 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAPH1Q70E73 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.4■□□□□ 0.22
RAPH1Q70E73 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAPH1Q70E73 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
RAPH1Q70E73 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RAPH1Q70E73 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.4■□□□□ 0.22
RAPH1Q70E73 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.4■□□□□ 0.22
RAPH1Q70E73 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAPH1Q70E73 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.4■□□□□ 0.22
RAPH1Q70E73 RPS2P28-201ENST00000314255 741 ntBASIC16.4■□□□□ 0.22
RAPH1Q70E73 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.4■□□□□ 0.22
RAPH1Q70E73 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.4■□□□□ 0.22
RAPH1Q70E73 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAPH1Q70E73 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.4■□□□□ 0.22
RAPH1Q70E73 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.4■□□□□ 0.22
RAPH1Q70E73 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAPH1Q70E73 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAPH1Q70E73 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAPH1Q70E73 AP002414.3-201ENST00000589352 1468 ntBASIC16.4■□□□□ 0.22
RAPH1Q70E73 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAPH1Q70E73 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAPH1Q70E73 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAPH1Q70E73 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAPH1Q70E73 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
RAPH1Q70E73 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 AF186996.4-201ENST00000467186 377 ntBASIC16.39■□□□□ 0.21
RAPH1Q70E73 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 KRT18P56-201ENST00000507275 550 ntBASIC16.39■□□□□ 0.21
RAPH1Q70E73 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 AC004790.2-201ENST00000623588 572 ntBASIC16.39■□□□□ 0.21
RAPH1Q70E73 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms