Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRNP1Q6NT89 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.84■□□□□ 0.29
TRNP1Q6NT89 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRNP1Q6NT89 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.84■□□□□ 0.29
TRNP1Q6NT89 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRNP1Q6NT89 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRNP1Q6NT89 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRNP1Q6NT89 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TRNP1Q6NT89 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRNP1Q6NT89 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TRNP1Q6NT89 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRNP1Q6NT89 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
TRNP1Q6NT89 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRNP1Q6NT89 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.83■□□□□ 0.29
TRNP1Q6NT89 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.83■□□□□ 0.28
TRNP1Q6NT89 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 AL512356.2-201ENST00000546955 174 ntBASIC16.83■□□□□ 0.28
TRNP1Q6NT89 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 AC105021.1-202ENST00000570572 669 ntBASIC16.83■□□□□ 0.28
TRNP1Q6NT89 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.83■□□□□ 0.28
TRNP1Q6NT89 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 AC003101.2-201ENST00000612557 442 ntBASIC16.82■□□□□ 0.28
TRNP1Q6NT89 MIR6080-201ENST00000617359 66 ntBASIC16.82■□□□□ 0.28
TRNP1Q6NT89 AP003680.1-201ENST00000598970 3660 ntBASIC16.82■□□□□ 0.28
TRNP1Q6NT89 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRNP1Q6NT89 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRNP1Q6NT89 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRNP1Q6NT89 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRNP1Q6NT89 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRNP1Q6NT89 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TRNP1Q6NT89 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRNP1Q6NT89 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRNP1Q6NT89 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRNP1Q6NT89 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
TRNP1Q6NT89 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRNP1Q6NT89 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRNP1Q6NT89 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRNP1Q6NT89 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.81■□□□□ 0.28
TRNP1Q6NT89 PRAL-201ENST00000624952 3286 ntBASIC16.81■□□□□ 0.28
TRNP1Q6NT89 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRNP1Q6NT89 AC011477.6-201ENST00000604980 1927 ntBASIC16.81■□□□□ 0.28
TRNP1Q6NT89 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms