Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 AL391825.1-201ENST00000457671 1364 ntBASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RNFT1Q5M7Z0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 AL592424.1-201ENST00000563624 1536 ntBASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 AC087499.6-201ENST00000411576 835 ntBASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 MTND2P7-201ENST00000521337 640 ntBASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 TPRX2P-201ENST00000535362 881 ntBASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 AC025048.3-201ENST00000590609 569 ntBASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 AC005702.4-201ENST00000618393 416 ntBASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 AC007431.3-201ENST00000623221 587 ntBASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 AC011676.5-201ENST00000624864 2660 ntBASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.56□□□□□ -0.08
RNFT1Q5M7Z0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 KRT17P7-201ENST00000451704 1104 ntBASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 INE1-201ENST00000456273 945 ntBASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms