Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 AL359881.2-201ENST00000602973 570 ntBASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 AC093726.1-201ENST00000608064 963 ntBASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 ME2P1-201ENST00000426028 1970 ntBASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 AC134407.2-201ENST00000625089 1978 ntBASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 AC092364.2-201ENST00000596710 2692 ntBASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 AL662844.4-201ENST00000606367 2838 ntBASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 RPL13P2-201ENST00000440687 659 ntBASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 GPR53P-205ENST00000457298 1084 ntBASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 MIR4259-201ENST00000584466 101 ntBASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHROOM1Q2M3G4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 CLK3P2-201ENST00000427566 1453 ntBASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 KRT8P37-201ENST00000451609 1420 ntBASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 MIR1909-201ENST00000411312 80 ntBASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 TARDBPP1-201ENST00000442013 1203 ntBASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 AL158212.4-201ENST00000624062 1286 ntBASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SHROOM1Q2M3G4 AD000864.1-201ENST00000624076 2295 ntBASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms