Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 AP001889.1-201ENST00000525414 633 ntBASIC22.9■■□□□ 1.26
SPHKAPQ2M3C7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SPHKAPQ2M3C7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SPHKAPQ2M3C7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SPHKAPQ2M3C7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
SPHKAPQ2M3C7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SPHKAPQ2M3C7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SPHKAPQ2M3C7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
SPHKAPQ2M3C7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC22.89■■□□□ 1.26
SPHKAPQ2M3C7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
SPHKAPQ2M3C7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SPHKAPQ2M3C7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SPHKAPQ2M3C7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SPHKAPQ2M3C7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC22.89■■□□□ 1.26
SPHKAPQ2M3C7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.26
SPHKAPQ2M3C7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC22.89■■□□□ 1.26
SPHKAPQ2M3C7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC22.89■■□□□ 1.26
SPHKAPQ2M3C7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
SPHKAPQ2M3C7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
SPHKAPQ2M3C7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SPHKAPQ2M3C7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SPHKAPQ2M3C7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
SPHKAPQ2M3C7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SPHKAPQ2M3C7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SPHKAPQ2M3C7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SPHKAPQ2M3C7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC22.89■■□□□ 1.25
SPHKAPQ2M3C7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SPHKAPQ2M3C7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 BTNL10-201ENST00000595971 695 ntBASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 KLF2P4-201ENST00000451959 1225 ntBASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 AC026410.3-201ENST00000514280 936 ntBASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 AC009542.2-202ENST00000619004 1067 ntBASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SPHKAPQ2M3C7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 TUBB1P2-201ENST00000422712 1306 ntBASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 TUBB1P1-201ENST00000503144 1300 ntBASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 DRD5P1-201ENST00000456605 1438 ntBASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 AC093525.8-201ENST00000624099 1342 ntBASIC22.87■■□□□ 1.25
SPHKAPQ2M3C7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC22.86■■□□□ 1.25
SPHKAPQ2M3C7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SPHKAPQ2M3C7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
SPHKAPQ2M3C7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC22.86■■□□□ 1.25
SPHKAPQ2M3C7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC22.86■■□□□ 1.25
SPHKAPQ2M3C7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
SPHKAPQ2M3C7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SPHKAPQ2M3C7 RNU1-114P-201ENST00000365297 166 ntBASIC22.86■■□□□ 1.25
SPHKAPQ2M3C7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
SPHKAPQ2M3C7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SPHKAPQ2M3C7 BAATP1-201ENST00000412284 1225 ntBASIC22.86■■□□□ 1.25
SPHKAPQ2M3C7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC22.86■■□□□ 1.25
SPHKAPQ2M3C7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC22.86■■□□□ 1.25
SPHKAPQ2M3C7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms