Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC112504.1-201ENST00000623415 1841 ntBASIC19.51■□□□□ 0.71
RFX7Q2KHR2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX7Q2KHR2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX7Q2KHR2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFX7Q2KHR2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RFX7Q2KHR2 MTND6P24-201ENST00000440466 518 ntBASIC19.51■□□□□ 0.71
RFX7Q2KHR2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.51■□□□□ 0.71
RFX7Q2KHR2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.51■□□□□ 0.71
RFX7Q2KHR2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.51■□□□□ 0.71
RFX7Q2KHR2 AC243562.2-201ENST00000561247 970 ntBASIC19.51■□□□□ 0.71
RFX7Q2KHR2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.51■□□□□ 0.71
RFX7Q2KHR2 AL662799.1-202ENST00000614205 422 ntBASIC19.51■□□□□ 0.71
RFX7Q2KHR2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RFX7Q2KHR2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX7Q2KHR2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX7Q2KHR2 PCDH8P1-201ENST00000428983 2773 ntBASIC19.51■□□□□ 0.71
RFX7Q2KHR2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFX7Q2KHR2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
RFX7Q2KHR2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.51■□□□□ 0.71
RFX7Q2KHR2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 PIN1P1-201ENST00000412108 996 ntBASIC19.5■□□□□ 0.71
RFX7Q2KHR2 COX5BP8-201ENST00000416911 349 ntBASIC19.5■□□□□ 0.71
RFX7Q2KHR2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 AC026979.3-201ENST00000607315 403 ntBASIC19.5■□□□□ 0.71
RFX7Q2KHR2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.5■□□□□ 0.71
RFX7Q2KHR2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 HCG11-201ENST00000411553 5696 ntBASIC19.49■□□□□ 0.71
RFX7Q2KHR2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 CYP4F24P-201ENST00000586049 1580 ntBASIC19.49■□□□□ 0.71
RFX7Q2KHR2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX7Q2KHR2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 AL691432.1-201ENST00000596308 1422 ntBASIC19.48■□□□□ 0.71
RFX7Q2KHR2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFX7Q2KHR2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms