Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SSX1Q16384 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSX1Q16384 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSX1Q16384 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSX1Q16384 AL353732.1-201ENST00000569618 1459 ntBASIC14.44□□□□□ -0.1
SSX1Q16384 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SSX1Q16384 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSX1Q16384 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.43□□□□□ -0.1
SSX1Q16384 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SSX1Q16384 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.43□□□□□ -0.1
SSX1Q16384 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 ARMC10P1-201ENST00000313754 855 ntBASIC14.43□□□□□ -0.1
SSX1Q16384 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.43□□□□□ -0.1
SSX1Q16384 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SSX1Q16384 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 PRYP5-201ENST00000451909 266 ntBASIC14.43□□□□□ -0.1
SSX1Q16384 MINOS1P3-201ENST00000457048 203 ntBASIC14.43□□□□□ -0.1
SSX1Q16384 SLC25A6P2-201ENST00000497974 877 ntBASIC14.43□□□□□ -0.1
SSX1Q16384 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.43□□□□□ -0.1
SSX1Q16384 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.43□□□□□ -0.1
SSX1Q16384 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 AC087641.1-201ENST00000557561 1021 ntBASIC14.43□□□□□ -0.1
SSX1Q16384 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.43□□□□□ -0.1
SSX1Q16384 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.43□□□□□ -0.1
SSX1Q16384 AC005363.2-201ENST00000618631 242 ntBASIC14.43□□□□□ -0.1
SSX1Q16384 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SSX1Q16384 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.43□□□□□ -0.1
SSX1Q16384 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SSX1Q16384 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.43□□□□□ -0.1
SSX1Q16384 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SSX1Q16384 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.43□□□□□ -0.1
SSX1Q16384 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
SSX1Q16384 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSX1Q16384 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SSX1Q16384 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.42□□□□□ -0.1
SSX1Q16384 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SSX1Q16384 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.42□□□□□ -0.1
SSX1Q16384 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.42□□□□□ -0.1
SSX1Q16384 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SSX1Q16384 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.42□□□□□ -0.1
SSX1Q16384 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SSX1Q16384 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.42□□□□□ -0.1
SSX1Q16384 NSUN5P1-202ENST00000421140 1535 ntBASIC14.42□□□□□ -0.1
SSX1Q16384 NSUN5P2-203ENST00000457352 1529 ntBASIC14.42□□□□□ -0.1
SSX1Q16384 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SSX1Q16384 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.42□□□□□ -0.1
SSX1Q16384 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SSX1Q16384 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SSX1Q16384 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.42□□□□□ -0.1
SSX1Q16384 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SSX1Q16384 AC009090.5-201ENST00000624886 2285 ntBASIC14.42□□□□□ -0.1
SSX1Q16384 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.42□□□□□ -0.1
SSX1Q16384 HAUS4P1-201ENST00000406739 1145 ntBASIC14.42□□□□□ -0.1
SSX1Q16384 CHCHD2P8-201ENST00000429873 447 ntBASIC14.42□□□□□ -0.1
SSX1Q16384 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.42□□□□□ -0.1
SSX1Q16384 AC107918.2-201ENST00000530817 355 ntBASIC14.42□□□□□ -0.1
SSX1Q16384 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.42□□□□□ -0.1
SSX1Q16384 AL139424.1-201ENST00000607572 797 ntBASIC14.42□□□□□ -0.1
SSX1Q16384 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.42□□□□□ -0.1
SSX1Q16384 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.42□□□□□ -0.1
SSX1Q16384 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 AC011477.6-201ENST00000604980 1927 ntBASIC14.42□□□□□ -0.1
SSX1Q16384 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.42□□□□□ -0.1
SSX1Q16384 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSX1Q16384 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms