Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.4■□□□□ 0.38
SMAD3P84022 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 NUS1P3-201ENST00000423502 862 ntBASIC17.4■□□□□ 0.38
SMAD3P84022 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.4■□□□□ 0.38
SMAD3P84022 AC016694.1-201ENST00000434179 700 ntBASIC17.4■□□□□ 0.38
SMAD3P84022 AC253536.4-201ENST00000440539 267 ntBASIC17.4■□□□□ 0.38
SMAD3P84022 AC093724.1-201ENST00000448659 1027 ntBASIC17.4■□□□□ 0.38
SMAD3P84022 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.4■□□□□ 0.38
SMAD3P84022 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
SMAD3P84022 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.4■□□□□ 0.38
SMAD3P84022 FAM86HP-204ENST00000513466 959 ntBASIC17.4■□□□□ 0.38
SMAD3P84022 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMAD3P84022 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.4■□□□□ 0.38
SMAD3P84022 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SMAD3P84022 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SMAD3P84022 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.4■□□□□ 0.38
SMAD3P84022 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.4■□□□□ 0.38
SMAD3P84022 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.4■□□□□ 0.38
SMAD3P84022 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 RHOXF1P1-202ENST00000635473 501 ntBASIC17.4■□□□□ 0.38
SMAD3P84022 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.4■□□□□ 0.38
SMAD3P84022 AC008687.7-202ENST00000637404 953 ntBASIC17.4■□□□□ 0.38
SMAD3P84022 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMAD3P84022 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SMAD3P84022 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SMAD3P84022 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 AC139713.2-201ENST00000641328 2723 ntBASIC17.4■□□□□ 0.38
SMAD3P84022 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMAD3P84022 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMAD3P84022 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
SMAD3P84022 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMAD3P84022 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SMAD3P84022 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
SMAD3P84022 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SMAD3P84022 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
SMAD3P84022 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
SMAD3P84022 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
SMAD3P84022 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
SMAD3P84022 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SMAD3P84022 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD3P84022 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
SMAD3P84022 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
SMAD3P84022 AC026954.1-201ENST00000429771 1293 ntBASIC17.39■□□□□ 0.37
SMAD3P84022 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.39■□□□□ 0.37
SMAD3P84022 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.39■□□□□ 0.37
SMAD3P84022 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD3P84022 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD3P84022 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.39■□□□□ 0.37
SMAD3P84022 FTH1P14-201ENST00000482930 551 ntBASIC17.39■□□□□ 0.37
SMAD3P84022 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD3P84022 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD3P84022 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD3P84022 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SMAD3P84022 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.39■□□□□ 0.37
SMAD3P84022 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.39■□□□□ 0.37
SMAD3P84022 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.39■□□□□ 0.37
SMAD3P84022 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.39■□□□□ 0.37
SMAD3P84022 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SMAD3P84022 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMAD3P84022 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD3P84022 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.39■□□□□ 0.37
SMAD3P84022 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD3P84022 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.38■□□□□ 0.37
SMAD3P84022 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SMAD3P84022 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SMAD3P84022 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SMAD3P84022 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMAD3P84022 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms