Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNRPFP62306 BANF1P1-201ENST00000553684 263 ntBASIC17.59■□□□□ 0.41
SNRPFP62306 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SNRPFP62306 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.59■□□□□ 0.41
SNRPFP62306 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.59■□□□□ 0.41
SNRPFP62306 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.59■□□□□ 0.41
SNRPFP62306 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.59■□□□□ 0.41
SNRPFP62306 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNRPFP62306 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SNRPFP62306 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNRPFP62306 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.59■□□□□ 0.41
SNRPFP62306 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNRPFP62306 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNRPFP62306 AC079328.2-201ENST00000561241 3354 ntBASIC17.59■□□□□ 0.41
SNRPFP62306 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
SNRPFP62306 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.58■□□□□ 0.41
SNRPFP62306 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.58■□□□□ 0.41
SNRPFP62306 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.41
SNRPFP62306 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.58■□□□□ 0.41
SNRPFP62306 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNRPFP62306 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SNRPFP62306 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SNRPFP62306 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.58■□□□□ 0.41
SNRPFP62306 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SNRPFP62306 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
SNRPFP62306 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
SNRPFP62306 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
SNRPFP62306 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SNRPFP62306 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNRPFP62306 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.58■□□□□ 0.4
SNRPFP62306 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.58■□□□□ 0.4
SNRPFP62306 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNRPFP62306 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.58■□□□□ 0.4
SNRPFP62306 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.58■□□□□ 0.4
SNRPFP62306 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.58■□□□□ 0.4
SNRPFP62306 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.58■□□□□ 0.4
SNRPFP62306 AC003101.2-201ENST00000612557 442 ntBASIC17.58■□□□□ 0.4
SNRPFP62306 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SNRPFP62306 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNRPFP62306 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.58■□□□□ 0.4
SNRPFP62306 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SNRPFP62306 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNRPFP62306 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNRPFP62306 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNRPFP62306 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNRPFP62306 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNRPFP62306 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SNRPFP62306 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNRPFP62306 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNRPFP62306 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNRPFP62306 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SNRPFP62306 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SNRPFP62306 AC134407.2-201ENST00000625089 1978 ntBASIC17.57■□□□□ 0.4
SNRPFP62306 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.57■□□□□ 0.4
SNRPFP62306 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SNRPFP62306 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.57■□□□□ 0.4
SNRPFP62306 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SNRPFP62306 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNRPFP62306 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNRPFP62306 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNRPFP62306 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.57■□□□□ 0.4
SNRPFP62306 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.57■□□□□ 0.4
SNRPFP62306 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.57■□□□□ 0.4
SNRPFP62306 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.57■□□□□ 0.4
SNRPFP62306 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.57■□□□□ 0.4
SNRPFP62306 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.57■□□□□ 0.4
SNRPFP62306 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.57■□□□□ 0.4
SNRPFP62306 AC025678.2-201ENST00000562061 970 ntBASIC17.57■□□□□ 0.4
SNRPFP62306 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.57■□□□□ 0.4
SNRPFP62306 RN7SL828P-201ENST00000607615 303 ntBASIC17.57■□□□□ 0.4
SNRPFP62306 MIR6080-201ENST00000617359 66 ntBASIC17.57■□□□□ 0.4
SNRPFP62306 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNRPFP62306 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNRPFP62306 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNRPFP62306 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.57■□□□□ 0.4
SNRPFP62306 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNRPFP62306 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNRPFP62306 CROCCP1-201ENST00000426910 5675 ntBASIC17.57■□□□□ 0.4
SNRPFP62306 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNRPFP62306 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.57■□□□□ 0.4
SNRPFP62306 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.57■□□□□ 0.4
SNRPFP62306 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNRPFP62306 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNRPFP62306 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNRPFP62306 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SNRPFP62306 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNRPFP62306 KRT8P37-201ENST00000451609 1420 ntBASIC17.56■□□□□ 0.4
SNRPFP62306 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
SNRPFP62306 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.56■□□□□ 0.4
SNRPFP62306 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNRPFP62306 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNRPFP62306 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNRPFP62306 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.56■□□□□ 0.4
SNRPFP62306 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.56■□□□□ 0.4
SNRPFP62306 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SNRPFP62306 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.56■□□□□ 0.4
SNRPFP62306 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNRPFP62306 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.56■□□□□ 0.4
SNRPFP62306 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.56■□□□□ 0.4
SNRPFP62306 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms