Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ZNF140P52738 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF140P52738 RBPMS2P1-201ENST00000437762 623 ntBASIC16.13■□□□□ 0.17
ZNF140P52738 DNAJB3-202ENST00000449667 1266 ntBASIC16.13■□□□□ 0.17
ZNF140P52738 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF140P52738 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF140P52738 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ZNF140P52738 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ZNF140P52738 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ZNF140P52738 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF140P52738 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF140P52738 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF140P52738 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF140P52738 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
ZNF140P52738 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF140P52738 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 AC011477.6-201ENST00000604980 1927 ntBASIC16.13■□□□□ 0.17
ZNF140P52738 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF140P52738 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF140P52738 AC008741.2-201ENST00000612792 3115 ntBASIC16.12■□□□□ 0.17
ZNF140P52738 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.12■□□□□ 0.17
ZNF140P52738 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.12■□□□□ 0.17
ZNF140P52738 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ZNF140P52738 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.12■□□□□ 0.17
ZNF140P52738 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ZNF140P52738 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 AL136982.4-201ENST00000437689 1740 ntBASIC16.12■□□□□ 0.17
ZNF140P52738 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.12■□□□□ 0.17
ZNF140P52738 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
ZNF140P52738 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.12■□□□□ 0.17
ZNF140P52738 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.12■□□□□ 0.17
ZNF140P52738 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
ZNF140P52738 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.12■□□□□ 0.17
ZNF140P52738 AC243562.2-201ENST00000561247 970 ntBASIC16.12■□□□□ 0.17
ZNF140P52738 AC026150.2-201ENST00000564693 1156 ntBASIC16.12■□□□□ 0.17
ZNF140P52738 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.12■□□□□ 0.17
ZNF140P52738 AL596442.2-201ENST00000610240 980 ntBASIC16.12■□□□□ 0.17
ZNF140P52738 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.12■□□□□ 0.17
ZNF140P52738 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.12■□□□□ 0.17
ZNF140P52738 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ZNF140P52738 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ZNF140P52738 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
ZNF140P52738 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
ZNF140P52738 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF140P52738 AP005117.1-202ENST00000581724 1908 ntBASIC16.11■□□□□ 0.17
ZNF140P52738 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF140P52738 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF140P52738 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF140P52738 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF140P52738 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF140P52738 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
ZNF140P52738 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF140P52738 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
ZNF140P52738 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF140P52738 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF140P52738 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.11■□□□□ 0.17
ZNF140P52738 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ZNF140P52738 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.11■□□□□ 0.17
ZNF140P52738 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.11■□□□□ 0.17
ZNF140P52738 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.11■□□□□ 0.17
ZNF140P52738 BANF1P1-201ENST00000553684 263 ntBASIC16.11■□□□□ 0.17
ZNF140P52738 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.11■□□□□ 0.17
ZNF140P52738 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF140P52738 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF140P52738 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF140P52738 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF140P52738 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF140P52738 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF140P52738 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.11■□□□□ 0.17
ZNF140P52738 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ZNF140P52738 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.11■□□□□ 0.17
ZNF140P52738 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF140P52738 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF140P52738 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF140P52738 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms