Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AL031731.1-201ENST00000642131 2094 ntBASIC14.83□□□□□ -0.03
CENPAP49450 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.83□□□□□ -0.04
CENPAP49450 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.83□□□□□ -0.04
CENPAP49450 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 RPS2P28-201ENST00000314255 741 ntBASIC14.83□□□□□ -0.04
CENPAP49450 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CENPAP49450 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.83□□□□□ -0.04
CENPAP49450 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 AC105339.3-201ENST00000560043 636 ntBASIC14.83□□□□□ -0.04
CENPAP49450 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.83□□□□□ -0.04
CENPAP49450 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CENPAP49450 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.83□□□□□ -0.04
CENPAP49450 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CENPAP49450 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.83□□□□□ -0.04
CENPAP49450 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CENPAP49450 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CENPAP49450 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.83□□□□□ -0.04
CENPAP49450 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CENPAP49450 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.83□□□□□ -0.04
CENPAP49450 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 AP002414.3-201ENST00000589352 1468 ntBASIC14.82□□□□□ -0.04
CENPAP49450 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.82□□□□□ -0.04
CENPAP49450 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.82□□□□□ -0.04
CENPAP49450 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CENPAP49450 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 SLC22A20-204ENST00000530038 1673 ntBASIC14.82□□□□□ -0.04
CENPAP49450 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CENPAP49450 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.82□□□□□ -0.04
CENPAP49450 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.82□□□□□ -0.04
CENPAP49450 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.82□□□□□ -0.04
CENPAP49450 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.82□□□□□ -0.04
CENPAP49450 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.82□□□□□ -0.04
CENPAP49450 AL356488.2-201ENST00000602755 427 ntBASIC14.82□□□□□ -0.04
CENPAP49450 AC008735.5-201ENST00000623544 497 ntBASIC14.82□□□□□ -0.04
CENPAP49450 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CENPAP49450 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CENPAP49450 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CENPAP49450 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.82□□□□□ -0.04
CENPAP49450 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.81□□□□□ -0.04
CENPAP49450 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CENPAP49450 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CENPAP49450 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.81□□□□□ -0.04
CENPAP49450 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
CENPAP49450 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 GGT4P-201ENST00000623672 1708 ntBASIC14.81□□□□□ -0.04
CENPAP49450 GPAA1P2-202ENST00000606848 1787 ntBASIC14.81□□□□□ -0.04
CENPAP49450 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.81□□□□□ -0.04
CENPAP49450 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.81□□□□□ -0.04
CENPAP49450 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.81□□□□□ -0.04
CENPAP49450 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.81□□□□□ -0.04
CENPAP49450 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.81□□□□□ -0.04
CENPAP49450 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.81□□□□□ -0.04
CENPAP49450 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CENPAP49450 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.81□□□□□ -0.04
CENPAP49450 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 AL121912.1-201ENST00000603683 238 ntBASIC14.81□□□□□ -0.04
CENPAP49450 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.81□□□□□ -0.04
CENPAP49450 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.81□□□□□ -0.04
CENPAP49450 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CENPAP49450 TP73-AS1-207ENST00000624167 988 ntBASIC14.81□□□□□ -0.04
CENPAP49450 PGM5P2-202ENST00000637225 1043 ntBASIC14.81□□□□□ -0.04
CENPAP49450 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CENPAP49450 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.81□□□□□ -0.04
CENPAP49450 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms