Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ARCN1P48444 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.28■□□□□ 0.2
ARCN1P48444 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.28■□□□□ 0.2
ARCN1P48444 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.28■□□□□ 0.2
ARCN1P48444 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.28■□□□□ 0.2
ARCN1P48444 AC245100.5-201ENST00000452108 331 ntBASIC16.28■□□□□ 0.2
ARCN1P48444 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
ARCN1P48444 AC112191.1-201ENST00000523689 701 ntBASIC16.28■□□□□ 0.2
ARCN1P48444 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.28■□□□□ 0.2
ARCN1P48444 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ARCN1P48444 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.28■□□□□ 0.2
ARCN1P48444 AC073389.1-201ENST00000595595 795 ntBASIC16.28■□□□□ 0.2
ARCN1P48444 AL365330.1-201ENST00000607459 531 ntBASIC16.28■□□□□ 0.2
ARCN1P48444 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.28■□□□□ 0.2
ARCN1P48444 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.28■□□□□ 0.2
ARCN1P48444 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
ARCN1P48444 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ARCN1P48444 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.28■□□□□ 0.2
ARCN1P48444 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARCN1P48444 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ARCN1P48444 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.27■□□□□ 0.2
ARCN1P48444 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARCN1P48444 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARCN1P48444 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARCN1P48444 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ARCN1P48444 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARCN1P48444 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARCN1P48444 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.27■□□□□ 0.2
ARCN1P48444 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.27■□□□□ 0.2
ARCN1P48444 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
ARCN1P48444 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARCN1P48444 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARCN1P48444 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ARCN1P48444 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARCN1P48444 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.27■□□□□ 0.2
ARCN1P48444 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.27■□□□□ 0.2
ARCN1P48444 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.27■□□□□ 0.2
ARCN1P48444 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.27■□□□□ 0.2
ARCN1P48444 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.27■□□□□ 0.2
ARCN1P48444 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.27■□□□□ 0.2
ARCN1P48444 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARCN1P48444 AC092902.6-201ENST00000641783 218 ntBASIC16.27■□□□□ 0.2
ARCN1P48444 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ARCN1P48444 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARCN1P48444 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARCN1P48444 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARCN1P48444 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.27■□□□□ 0.19
ARCN1P48444 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARCN1P48444 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ARCN1P48444 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARCN1P48444 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ARCN1P48444 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ARCN1P48444 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARCN1P48444 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARCN1P48444 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARCN1P48444 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ARCN1P48444 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARCN1P48444 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARCN1P48444 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.26■□□□□ 0.19
ARCN1P48444 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.26■□□□□ 0.19
ARCN1P48444 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARCN1P48444 FOXO1B-201ENST00000504678 1527 ntBASIC16.26■□□□□ 0.19
ARCN1P48444 LINC00554-201ENST00000564841 3011 ntBASIC16.26■□□□□ 0.19
ARCN1P48444 ELL2P1-201ENST00000413990 1906 ntBASIC16.26■□□□□ 0.19
ARCN1P48444 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARCN1P48444 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ARCN1P48444 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.26■□□□□ 0.19
ARCN1P48444 HAUS4P1-201ENST00000406739 1145 ntBASIC16.26■□□□□ 0.19
ARCN1P48444 DNAJB3-202ENST00000449667 1266 ntBASIC16.26■□□□□ 0.19
ARCN1P48444 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.26■□□□□ 0.19
ARCN1P48444 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.26■□□□□ 0.19
ARCN1P48444 RARRES2P8-201ENST00000566335 367 ntBASIC16.26■□□□□ 0.19
ARCN1P48444 MIR4321-201ENST00000592276 80 ntBASIC16.26■□□□□ 0.19
ARCN1P48444 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.26■□□□□ 0.19
ARCN1P48444 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.26■□□□□ 0.19
ARCN1P48444 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
ARCN1P48444 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
ARCN1P48444 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.26■□□□□ 0.19
ARCN1P48444 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARCN1P48444 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARCN1P48444 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARCN1P48444 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARCN1P48444 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARCN1P48444 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms