Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SLC6A12P48065 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC6A12P48065 AL691432.1-201ENST00000596308 1422 ntBASIC15.65■□□□□ 0.1
SLC6A12P48065 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC6A12P48065 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
SLC6A12P48065 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC6A12P48065 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.64■□□□□ 0.1
SLC6A12P48065 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SLC6A12P48065 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 UXT-AS1-201ENST00000590504 1525 ntBASIC15.64■□□□□ 0.09
SLC6A12P48065 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC6A12P48065 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC6A12P48065 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 RPSAP43-201ENST00000402237 625 ntBASIC15.64■□□□□ 0.09
SLC6A12P48065 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.64■□□□□ 0.09
SLC6A12P48065 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 BX842568.4-201ENST00000421222 227 ntBASIC15.64■□□□□ 0.09
SLC6A12P48065 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC6A12P48065 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC6A12P48065 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC6A12P48065 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC6A12P48065 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC6A12P48065 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC6A12P48065 AC010327.4-202ENST00000591484 748 ntBASIC15.64■□□□□ 0.09
SLC6A12P48065 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC6A12P48065 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC6A12P48065 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC6A12P48065 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SLC6A12P48065 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
SLC6A12P48065 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC6A12P48065 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A12P48065 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SLC6A12P48065 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A12P48065 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A12P48065 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A12P48065 AP3S2-216ENST00000617003 1561 ntBASIC15.63■□□□□ 0.09
SLC6A12P48065 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A12P48065 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SLC6A12P48065 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC6A12P48065 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A12P48065 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
SLC6A12P48065 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A12P48065 RPS8P6-201ENST00000426177 609 ntBASIC15.63■□□□□ 0.09
SLC6A12P48065 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.63■□□□□ 0.09
SLC6A12P48065 AC112482.1-201ENST00000492080 688 ntBASIC15.63■□□□□ 0.09
SLC6A12P48065 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC6A12P48065 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A12P48065 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC6A12P48065 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A12P48065 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC6A12P48065 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC6A12P48065 AC055717.3-201ENST00000622967 595 ntBASIC15.63■□□□□ 0.09
SLC6A12P48065 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC6A12P48065 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A12P48065 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC6A12P48065 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A12P48065 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC6A12P48065 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A12P48065 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
SLC6A12P48065 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A12P48065 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SLC6A12P48065 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SLC6A12P48065 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A12P48065 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
SLC6A12P48065 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A12P48065 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms