Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.93■□□□□ 0.3
MMP13P45452 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.93■□□□□ 0.3
MMP13P45452 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 GPAA1P2-202ENST00000606848 1787 ntBASIC16.93■□□□□ 0.3
MMP13P45452 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.93■□□□□ 0.3
MMP13P45452 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP13P45452 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP13P45452 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.93■□□□□ 0.3
MMP13P45452 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
MMP13P45452 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.93■□□□□ 0.3
MMP13P45452 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP13P45452 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP13P45452 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.93■□□□□ 0.3
MMP13P45452 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.93■□□□□ 0.3
MMP13P45452 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP13P45452 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.93■□□□□ 0.3
MMP13P45452 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MMP13P45452 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP13P45452 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
MMP13P45452 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.93■□□□□ 0.3
MMP13P45452 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP13P45452 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP13P45452 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP13P45452 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP13P45452 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP13P45452 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
MMP13P45452 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MMP13P45452 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
MMP13P45452 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP13P45452 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP13P45452 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP13P45452 AP002472.1-201ENST00000577490 586 ntBASIC16.92■□□□□ 0.3
MMP13P45452 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.92■□□□□ 0.3
MMP13P45452 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.92■□□□□ 0.3
MMP13P45452 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.92■□□□□ 0.3
MMP13P45452 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MMP13P45452 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
MMP13P45452 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP13P45452 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP13P45452 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MMP13P45452 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MMP13P45452 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MMP13P45452 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP13P45452 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP13P45452 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP13P45452 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP13P45452 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.92■□□□□ 0.3
MMP13P45452 PPT1-215ENST00000641471 2368 ntBASIC16.92■□□□□ 0.3
MMP13P45452 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MMP13P45452 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MMP13P45452 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP13P45452 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP13P45452 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MMP13P45452 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MMP13P45452 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MMP13P45452 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.91■□□□□ 0.3
MMP13P45452 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MMP13P45452 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.91■□□□□ 0.3
MMP13P45452 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP13P45452 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP13P45452 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
MMP13P45452 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.91■□□□□ 0.3
MMP13P45452 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
MMP13P45452 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.91■□□□□ 0.3
MMP13P45452 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.91■□□□□ 0.3
MMP13P45452 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP13P45452 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.91■□□□□ 0.3
MMP13P45452 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.91■□□□□ 0.3
MMP13P45452 AC004832.2-201ENST00000426397 482 ntBASIC16.91■□□□□ 0.3
MMP13P45452 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP13P45452 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP13P45452 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP13P45452 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
MMP13P45452 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.91■□□□□ 0.3
MMP13P45452 AC112191.1-201ENST00000523689 701 ntBASIC16.91■□□□□ 0.3
MMP13P45452 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.91■□□□□ 0.3
MMP13P45452 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.91■□□□□ 0.3
MMP13P45452 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
MMP13P45452 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.91■□□□□ 0.3
MMP13P45452 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.91■□□□□ 0.3
MMP13P45452 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms