Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX2-1P43699 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX2-1P43699 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NKX2-1P43699 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX2-1P43699 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX2-1P43699 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.37□□□□□ -0.27
NKX2-1P43699 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
NKX2-1P43699 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.37□□□□□ -0.27
NKX2-1P43699 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX2-1P43699 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.37□□□□□ -0.27
NKX2-1P43699 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX2-1P43699 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX2-1P43699 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX2-1P43699 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX2-1P43699 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX2-1P43699 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX2-1P43699 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
NKX2-1P43699 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NKX2-1P43699 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX2-1P43699 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX2-1P43699 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.37□□□□□ -0.27
NKX2-1P43699 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NKX2-1P43699 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NKX2-1P43699 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NKX2-1P43699 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX2-1P43699 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX2-1P43699 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.36□□□□□ -0.27
NKX2-1P43699 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.36□□□□□ -0.27
NKX2-1P43699 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NKX2-1P43699 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX2-1P43699 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NKX2-1P43699 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
NKX2-1P43699 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NKX2-1P43699 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX2-1P43699 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NKX2-1P43699 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NKX2-1P43699 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NKX2-1P43699 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.36□□□□□ -0.27
NKX2-1P43699 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX2-1P43699 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NKX2-1P43699 KRT18P21-201ENST00000515767 1272 ntBASIC13.36□□□□□ -0.27
NKX2-1P43699 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
NKX2-1P43699 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.36□□□□□ -0.27
NKX2-1P43699 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.36□□□□□ -0.27
NKX2-1P43699 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.36□□□□□ -0.27
NKX2-1P43699 AC073592.4-201ENST00000623827 446 ntBASIC13.36□□□□□ -0.27
NKX2-1P43699 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.36□□□□□ -0.27
NKX2-1P43699 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NKX2-1P43699 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.36□□□□□ -0.27
NKX2-1P43699 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX2-1P43699 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX2-1P43699 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX2-1P43699 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms