Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PRPHP41219 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PRPHP41219 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PRPHP41219 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.35■□□□□ 0.53
PRPHP41219 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PRPHP41219 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.35■□□□□ 0.53
PRPHP41219 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PRPHP41219 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.34■□□□□ 0.53
PRPHP41219 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRPHP41219 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPHP41219 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPHP41219 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
PRPHP41219 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPHP41219 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.34■□□□□ 0.53
PRPHP41219 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPHP41219 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPHP41219 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPHP41219 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPHP41219 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPHP41219 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPHP41219 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRPHP41219 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPHP41219 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPHP41219 AC004461.1-201ENST00000412461 403 ntBASIC18.34■□□□□ 0.53
PRPHP41219 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.34■□□□□ 0.53
PRPHP41219 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.34■□□□□ 0.53
PRPHP41219 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPHP41219 SLC25A39P2-201ENST00000537614 270 ntBASIC18.34■□□□□ 0.53
PRPHP41219 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPHP41219 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.34■□□□□ 0.53
PRPHP41219 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.34■□□□□ 0.53
PRPHP41219 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
PRPHP41219 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PRPHP41219 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPHP41219 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPHP41219 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.34■□□□□ 0.53
PRPHP41219 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.34■□□□□ 0.53
PRPHP41219 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRPHP41219 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PRPHP41219 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRPHP41219 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPHP41219 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PRPHP41219 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPHP41219 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRPHP41219 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRPHP41219 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.33■□□□□ 0.53
PRPHP41219 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PRPHP41219 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRPHP41219 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.33■□□□□ 0.53
PRPHP41219 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRPHP41219 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PRPHP41219 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.33■□□□□ 0.53
PRPHP41219 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRPHP41219 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PRPHP41219 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPHP41219 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PRPHP41219 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPHP41219 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPHP41219 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPHP41219 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPHP41219 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.33■□□□□ 0.52
PRPHP41219 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.33■□□□□ 0.52
PRPHP41219 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PRPHP41219 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.33■□□□□ 0.52
PRPHP41219 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.33■□□□□ 0.52
PRPHP41219 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.33■□□□□ 0.52
PRPHP41219 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPHP41219 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPHP41219 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.33■□□□□ 0.52
PRPHP41219 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.33■□□□□ 0.52
PRPHP41219 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.33■□□□□ 0.52
PRPHP41219 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPHP41219 UXT-AS1-201ENST00000590504 1525 ntBASIC18.33■□□□□ 0.52
PRPHP41219 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PRPHP41219 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PRPHP41219 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPHP41219 AP001282.1-201ENST00000531301 1499 ntBASIC18.33■□□□□ 0.52
PRPHP41219 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.33■□□□□ 0.52
PRPHP41219 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPHP41219 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PRPHP41219 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPHP41219 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PRPHP41219 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PRPHP41219 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRPHP41219 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPHP41219 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPHP41219 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPHP41219 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPHP41219 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
PRPHP41219 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms