Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.35■□□□□ 0.85
COL15A1P39059 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL15A1P39059 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL15A1P39059 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL15A1P39059 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.35■□□□□ 0.85
COL15A1P39059 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.35■□□□□ 0.85
COL15A1P39059 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.35■□□□□ 0.85
COL15A1P39059 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL15A1P39059 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL15A1P39059 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
COL15A1P39059 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.35■□□□□ 0.85
COL15A1P39059 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL15A1P39059 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
COL15A1P39059 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL15A1P39059 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
COL15A1P39059 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.35■□□□□ 0.85
COL15A1P39059 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL15A1P39059 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.35■□□□□ 0.85
COL15A1P39059 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL15A1P39059 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.35■□□□□ 0.85
COL15A1P39059 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
COL15A1P39059 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.34■□□□□ 0.85
COL15A1P39059 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.34■□□□□ 0.85
COL15A1P39059 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COL15A1P39059 HNRNPA1P13-201ENST00000510646 963 ntBASIC20.34■□□□□ 0.85
COL15A1P39059 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
COL15A1P39059 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.34■□□□□ 0.85
COL15A1P39059 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.34■□□□□ 0.85
COL15A1P39059 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.34■□□□□ 0.85
COL15A1P39059 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.34■□□□□ 0.85
COL15A1P39059 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.34■□□□□ 0.85
COL15A1P39059 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.34■□□□□ 0.85
COL15A1P39059 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.34■□□□□ 0.85
COL15A1P39059 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.34■□□□□ 0.85
COL15A1P39059 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.34■□□□□ 0.85
COL15A1P39059 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COL15A1P39059 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
COL15A1P39059 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
COL15A1P39059 UBALD1-205ENST00000590891 2641 ntBASIC20.34■□□□□ 0.85
COL15A1P39059 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.34■□□□□ 0.85
COL15A1P39059 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
COL15A1P39059 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
COL15A1P39059 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.34■□□□□ 0.85
COL15A1P39059 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
COL15A1P39059 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.34■□□□□ 0.85
COL15A1P39059 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC20.34■□□□□ 0.85
COL15A1P39059 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.34■□□□□ 0.85
COL15A1P39059 CTBP2P5-201ENST00000454986 1264 ntBASIC20.34■□□□□ 0.85
COL15A1P39059 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.34■□□□□ 0.85
COL15A1P39059 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.34■□□□□ 0.85
COL15A1P39059 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
COL15A1P39059 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL15A1P39059 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.34■□□□□ 0.85
COL15A1P39059 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.34■□□□□ 0.85
COL15A1P39059 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.34■□□□□ 0.85
COL15A1P39059 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.34■□□□□ 0.85
COL15A1P39059 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.34■□□□□ 0.85
COL15A1P39059 BRI3BPP1-201ENST00000594224 787 ntBASIC20.34■□□□□ 0.85
COL15A1P39059 AC092171.3-201ENST00000610122 2651 ntBASIC20.34■□□□□ 0.85
COL15A1P39059 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.34■□□□□ 0.85
COL15A1P39059 CU634019.7-201ENST00000624153 1185 ntBASIC20.34■□□□□ 0.85
COL15A1P39059 FP236241.2-201ENST00000624906 1185 ntBASIC20.34■□□□□ 0.85
COL15A1P39059 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.34■□□□□ 0.85
COL15A1P39059 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
COL15A1P39059 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL15A1P39059 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL15A1P39059 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL15A1P39059 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL15A1P39059 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL15A1P39059 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL15A1P39059 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.33■□□□□ 0.85
COL15A1P39059 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL15A1P39059 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
COL15A1P39059 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
COL15A1P39059 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
COL15A1P39059 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.33■□□□□ 0.84
COL15A1P39059 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL15A1P39059 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL15A1P39059 KRT8P22-201ENST00000562317 1415 ntBASIC20.33■□□□□ 0.84
COL15A1P39059 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL15A1P39059 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL15A1P39059 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL15A1P39059 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL15A1P39059 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms