Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC079776.2-201ENST00000641154 1609 ntBASIC13.45□□□□□ -0.26
SNCAP37840 OR2I1P-210ENST00000642037 4691 ntBASIC13.45□□□□□ -0.26
SNCAP37840 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.45□□□□□ -0.26
SNCAP37840 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.45□□□□□ -0.26
SNCAP37840 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.45□□□□□ -0.26
SNCAP37840 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.45□□□□□ -0.26
SNCAP37840 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.45□□□□□ -0.26
SNCAP37840 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.45□□□□□ -0.26
SNCAP37840 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 GRK6P1-201ENST00000400595 1711 ntBASIC13.44□□□□□ -0.26
SNCAP37840 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.44□□□□□ -0.26
SNCAP37840 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.44□□□□□ -0.26
SNCAP37840 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.44□□□□□ -0.26
SNCAP37840 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 AC005089.1-201ENST00000619486 2241 ntBASIC13.44□□□□□ -0.26
SNCAP37840 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 AP002414.1-201ENST00000391405 1147 ntBASIC13.44□□□□□ -0.26
SNCAP37840 NUS1P2-201ENST00000417358 873 ntBASIC13.44□□□□□ -0.26
SNCAP37840 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SNCAP37840 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.44□□□□□ -0.26
SNCAP37840 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SNCAP37840 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
SNCAP37840 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.44□□□□□ -0.26
SNCAP37840 MIR5100-201ENST00000579544 119 ntBASIC13.44□□□□□ -0.26
SNCAP37840 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.44□□□□□ -0.26
SNCAP37840 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.44□□□□□ -0.26
SNCAP37840 AC004817.3-201ENST00000602957 2129 ntBASIC13.44□□□□□ -0.26
SNCAP37840 AL591684.3-201ENST00000605187 298 ntBASIC13.44□□□□□ -0.26
SNCAP37840 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.44□□□□□ -0.26
SNCAP37840 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
SNCAP37840 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.44□□□□□ -0.26
SNCAP37840 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.44□□□□□ -0.26
SNCAP37840 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.44□□□□□ -0.26
SNCAP37840 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SNCAP37840 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SNCAP37840 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SNCAP37840 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.44□□□□□ -0.26
SNCAP37840 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.44□□□□□ -0.26
SNCAP37840 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.44□□□□□ -0.26
SNCAP37840 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.44□□□□□ -0.26
SNCAP37840 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SNCAP37840 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
SNCAP37840 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNCAP37840 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.43□□□□□ -0.26
SNCAP37840 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SNCAP37840 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
SNCAP37840 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SNCAP37840 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.43□□□□□ -0.26
SNCAP37840 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.43□□□□□ -0.26
SNCAP37840 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.43□□□□□ -0.26
SNCAP37840 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SNCAP37840 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SNCAP37840 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCAP37840 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
SNCAP37840 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms