Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HOXC12P31275 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HOXC12P31275 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HOXC12P31275 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
HOXC12P31275 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.46□□□□□ -0.09
HOXC12P31275 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HOXC12P31275 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HOXC12P31275 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.46□□□□□ -0.09
HOXC12P31275 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.46□□□□□ -0.09
HOXC12P31275 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HOXC12P31275 SPCS2P4-201ENST00000436160 681 ntBASIC14.46□□□□□ -0.09
HOXC12P31275 UGT1A2P-201ENST00000454886 866 ntBASIC14.46□□□□□ -0.09
HOXC12P31275 AC243562.1-201ENST00000560672 389 ntBASIC14.46□□□□□ -0.09
HOXC12P31275 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HOXC12P31275 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.46□□□□□ -0.09
HOXC12P31275 AC027307.2-201ENST00000591252 911 ntBASIC14.46□□□□□ -0.09
HOXC12P31275 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.46□□□□□ -0.09
HOXC12P31275 LINC02560-201ENST00000596379 459 ntBASIC14.46□□□□□ -0.09
HOXC12P31275 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
HOXC12P31275 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HOXC12P31275 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.46□□□□□ -0.09
HOXC12P31275 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HOXC12P31275 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HOXC12P31275 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HOXC12P31275 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HOXC12P31275 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
HOXC12P31275 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.1
HOXC12P31275 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HOXC12P31275 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
HOXC12P31275 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HOXC12P31275 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
HOXC12P31275 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
HOXC12P31275 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HOXC12P31275 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.45□□□□□ -0.1
HOXC12P31275 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.45□□□□□ -0.1
HOXC12P31275 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.45□□□□□ -0.1
HOXC12P31275 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
HOXC12P31275 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HOXC12P31275 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.45□□□□□ -0.1
HOXC12P31275 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.45□□□□□ -0.1
HOXC12P31275 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.45□□□□□ -0.1
HOXC12P31275 AC107890.1-201ENST00000422478 521 ntBASIC14.45□□□□□ -0.1
HOXC12P31275 FAM58DP-201ENST00000428076 619 ntBASIC14.45□□□□□ -0.1
HOXC12P31275 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.45□□□□□ -0.1
HOXC12P31275 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.45□□□□□ -0.1
HOXC12P31275 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HOXC12P31275 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.45□□□□□ -0.1
HOXC12P31275 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.45□□□□□ -0.1
HOXC12P31275 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.45□□□□□ -0.1
HOXC12P31275 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.45□□□□□ -0.1
HOXC12P31275 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.45□□□□□ -0.1
HOXC12P31275 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.45□□□□□ -0.1
HOXC12P31275 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.45□□□□□ -0.1
HOXC12P31275 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.45□□□□□ -0.1
HOXC12P31275 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.45□□□□□ -0.1
HOXC12P31275 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.45□□□□□ -0.1
HOXC12P31275 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.45□□□□□ -0.1
HOXC12P31275 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HOXC12P31275 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.45□□□□□ -0.1
HOXC12P31275 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HOXC12P31275 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HOXC12P31275 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 AL031731.1-201ENST00000642131 2094 ntBASIC14.45□□□□□ -0.1
HOXC12P31275 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HOXC12P31275 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.45□□□□□ -0.1
HOXC12P31275 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HOXC12P31275 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 PCGF3-213ENST00000620529 1899 ntBASIC14.44□□□□□ -0.1
HOXC12P31275 AL512652.2-201ENST00000625156 1716 ntBASIC14.44□□□□□ -0.1
HOXC12P31275 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HOXC12P31275 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC12P31275 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
HOXC12P31275 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms