Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.95□□□□□ -0.02
SHC1P29353 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.95□□□□□ -0.02
SHC1P29353 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.95□□□□□ -0.02
SHC1P29353 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.95□□□□□ -0.02
SHC1P29353 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.95□□□□□ -0.02
SHC1P29353 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.95□□□□□ -0.02
SHC1P29353 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHC1P29353 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SHC1P29353 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.95□□□□□ -0.02
SHC1P29353 AC021097.1-201ENST00000607902 574 ntBASIC14.95□□□□□ -0.02
SHC1P29353 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.95□□□□□ -0.02
SHC1P29353 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
SHC1P29353 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 AC023824.1-201ENST00000562945 2975 ntBASIC14.95□□□□□ -0.02
SHC1P29353 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.95□□□□□ -0.02
SHC1P29353 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SHC1P29353 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHC1P29353 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.95□□□□□ -0.02
SHC1P29353 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHC1P29353 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.95□□□□□ -0.02
SHC1P29353 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SHC1P29353 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.94□□□□□ -0.02
SHC1P29353 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SHC1P29353 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 ELL2P1-201ENST00000413990 1906 ntBASIC14.94□□□□□ -0.02
SHC1P29353 GGT3P-204ENST00000453783 1664 ntBASIC14.94□□□□□ -0.02
SHC1P29353 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.94□□□□□ -0.02
SHC1P29353 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SHC1P29353 GPAA1P2-202ENST00000606848 1787 ntBASIC14.94□□□□□ -0.02
SHC1P29353 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SHC1P29353 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
SHC1P29353 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.94□□□□□ -0.02
SHC1P29353 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.94□□□□□ -0.02
SHC1P29353 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 MKNK2P1-201ENST00000437526 628 ntBASIC14.94□□□□□ -0.02
SHC1P29353 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.94□□□□□ -0.02
SHC1P29353 CEND1P1-201ENST00000451006 455 ntBASIC14.94□□□□□ -0.02
SHC1P29353 YBX1P5-201ENST00000509441 847 ntBASIC14.94□□□□□ -0.02
SHC1P29353 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.94□□□□□ -0.02
SHC1P29353 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.94□□□□□ -0.02
SHC1P29353 MIR3687-2-201ENST00000577708 61 ntBASIC14.94□□□□□ -0.02
SHC1P29353 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SHC1P29353 MIR3687-1-201ENST00000614492 61 ntBASIC14.94□□□□□ -0.02
SHC1P29353 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.94□□□□□ -0.02
SHC1P29353 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SHC1P29353 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.94□□□□□ -0.02
SHC1P29353 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SHC1P29353 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 AC092384.3-202ENST00000564646 2873 ntBASIC14.94□□□□□ -0.02
SHC1P29353 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHC1P29353 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SHC1P29353 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.94□□□□□ -0.02
SHC1P29353 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.94□□□□□ -0.02
SHC1P29353 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.93□□□□□ -0.02
SHC1P29353 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.93□□□□□ -0.02
SHC1P29353 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHC1P29353 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.93□□□□□ -0.02
SHC1P29353 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHC1P29353 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHC1P29353 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.93□□□□□ -0.02
SHC1P29353 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SHC1P29353 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.93□□□□□ -0.02
SHC1P29353 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHC1P29353 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SHC1P29353 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SHC1P29353 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHC1P29353 MIR1233-2-201ENST00000408138 82 ntBASIC14.93□□□□□ -0.02
SHC1P29353 MIR1233-1-201ENST00000408722 82 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms