Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MSR1P21757 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
MSR1P21757 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MSR1P21757 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MSR1P21757 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MSR1P21757 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
MSR1P21757 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MSR1P21757 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
MSR1P21757 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.4□□□□□ -0.1
MSR1P21757 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MSR1P21757 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MSR1P21757 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MSR1P21757 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.4□□□□□ -0.1
MSR1P21757 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
MSR1P21757 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.39□□□□□ -0.11
MSR1P21757 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.39□□□□□ -0.11
MSR1P21757 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.39□□□□□ -0.11
MSR1P21757 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
MSR1P21757 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.39□□□□□ -0.11
MSR1P21757 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.39□□□□□ -0.11
MSR1P21757 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 MIR574-201ENST00000385209 96 ntBASIC14.39□□□□□ -0.11
MSR1P21757 FAM58CP-201ENST00000435741 640 ntBASIC14.39□□□□□ -0.11
MSR1P21757 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.39□□□□□ -0.11
MSR1P21757 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
MSR1P21757 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 AL365330.1-201ENST00000607459 531 ntBASIC14.39□□□□□ -0.11
MSR1P21757 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.39□□□□□ -0.11
MSR1P21757 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MSR1P21757 AKAP8P1-201ENST00000434743 1349 ntBASIC14.39□□□□□ -0.11
MSR1P21757 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.38□□□□□ -0.11
MSR1P21757 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.38□□□□□ -0.11
MSR1P21757 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.38□□□□□ -0.11
MSR1P21757 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
MSR1P21757 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MSR1P21757 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.38□□□□□ -0.11
MSR1P21757 AC024909.3-201ENST00000611513 2257 ntBASIC14.38□□□□□ -0.11
MSR1P21757 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
MSR1P21757 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MSR1P21757 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 AL355306.1-201ENST00000415580 579 ntBASIC14.38□□□□□ -0.11
MSR1P21757 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.38□□□□□ -0.11
MSR1P21757 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 POLD2P1-201ENST00000511220 997 ntBASIC14.38□□□□□ -0.11
MSR1P21757 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.38□□□□□ -0.11
MSR1P21757 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.38□□□□□ -0.11
MSR1P21757 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.38□□□□□ -0.11
MSR1P21757 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.38□□□□□ -0.11
MSR1P21757 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MSR1P21757 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.38□□□□□ -0.11
MSR1P21757 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms