Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LINC01225-203ENST00000563550 1244 ntBASIC16.42■□□□□ 0.22
HLA-DPA1P20036 AP000842.3-202ENST00000569238 1080 ntBASIC16.42■□□□□ 0.22
HLA-DPA1P20036 MIR4469-201ENST00000583919 79 ntBASIC16.42■□□□□ 0.22
HLA-DPA1P20036 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.42■□□□□ 0.22
HLA-DPA1P20036 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 RPSAP43-201ENST00000402237 625 ntBASIC16.41■□□□□ 0.22
HLA-DPA1P20036 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 AC024267.1-201ENST00000582320 895 ntBASIC16.41■□□□□ 0.22
HLA-DPA1P20036 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 AC105339.1-204ENST00000636249 355 ntBASIC16.41■□□□□ 0.22
HLA-DPA1P20036 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DPA1P20036 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 AL592309.1-201ENST00000443127 649 ntBASIC16.4■□□□□ 0.22
HLA-DPA1P20036 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 AC112482.1-201ENST00000492080 688 ntBASIC16.4■□□□□ 0.22
HLA-DPA1P20036 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 AC022145.2-201ENST00000598203 171 ntBASIC16.4■□□□□ 0.22
HLA-DPA1P20036 AC084121.4-201ENST00000641598 221 ntBASIC16.4■□□□□ 0.22
HLA-DPA1P20036 AF228730.8-201ENST00000642140 221 ntBASIC16.4■□□□□ 0.22
HLA-DPA1P20036 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms