Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNB2P17787 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.2■□□□□ 0.34
CHRNB2P17787 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNB2P17787 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRNB2P17787 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNB2P17787 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNB2P17787 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNB2P17787 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.19■□□□□ 0.34
CHRNB2P17787 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNB2P17787 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNB2P17787 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNB2P17787 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNB2P17787 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CHRNB2P17787 AP003680.1-201ENST00000598970 3660 ntBASIC17.19■□□□□ 0.34
CHRNB2P17787 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CHRNB2P17787 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNB2P17787 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNB2P17787 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.19■□□□□ 0.34
CHRNB2P17787 HTR5BP-201ENST00000430851 1154 ntBASIC17.19■□□□□ 0.34
CHRNB2P17787 SPDYE11-202ENST00000450699 704 ntBASIC17.19■□□□□ 0.34
CHRNB2P17787 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.19■□□□□ 0.34
CHRNB2P17787 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.19■□□□□ 0.34
CHRNB2P17787 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.19■□□□□ 0.34
CHRNB2P17787 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNB2P17787 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNB2P17787 SPDYE9P-201ENST00000570642 692 ntBASIC17.19■□□□□ 0.34
CHRNB2P17787 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.19■□□□□ 0.34
CHRNB2P17787 SPDYE10P-202ENST00000612005 668 ntBASIC17.19■□□□□ 0.34
CHRNB2P17787 SPDYE8P-202ENST00000612377 668 ntBASIC17.19■□□□□ 0.34
CHRNB2P17787 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNB2P17787 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNB2P17787 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHRNB2P17787 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNB2P17787 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNB2P17787 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNB2P17787 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CHRNB2P17787 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNB2P17787 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CHRNB2P17787 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.19■□□□□ 0.34
CHRNB2P17787 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNB2P17787 AC092384.3-202ENST00000564646 2873 ntBASIC17.18■□□□□ 0.34
CHRNB2P17787 AP001282.1-201ENST00000531301 1499 ntBASIC17.18■□□□□ 0.34
CHRNB2P17787 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNB2P17787 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNB2P17787 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRNB2P17787 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNB2P17787 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNB2P17787 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNB2P17787 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CHRNB2P17787 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.18■□□□□ 0.34
CHRNB2P17787 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNB2P17787 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CHRNB2P17787 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CHRNB2P17787 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.18■□□□□ 0.34
CHRNB2P17787 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNB2P17787 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNB2P17787 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNB2P17787 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRNB2P17787 MKNK2P1-201ENST00000437526 628 ntBASIC17.18■□□□□ 0.34
CHRNB2P17787 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CHRNB2P17787 RN7SL589P-201ENST00000481268 310 ntBASIC17.18■□□□□ 0.34
CHRNB2P17787 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.18■□□□□ 0.34
CHRNB2P17787 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.18■□□□□ 0.34
CHRNB2P17787 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.18■□□□□ 0.34
CHRNB2P17787 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.18■□□□□ 0.34
CHRNB2P17787 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNB2P17787 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.18■□□□□ 0.34
CHRNB2P17787 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRNB2P17787 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.18■□□□□ 0.34
CHRNB2P17787 MTDHP5-201ENST00000598980 586 ntBASIC17.18■□□□□ 0.34
CHRNB2P17787 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNB2P17787 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRNB2P17787 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNB2P17787 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRNB2P17787 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNB2P17787 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNB2P17787 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CHRNB2P17787 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CHRNB2P17787 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CHRNB2P17787 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNB2P17787 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNB2P17787 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNB2P17787 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNB2P17787 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNB2P17787 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNB2P17787 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNB2P17787 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNB2P17787 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNB2P17787 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRNB2P17787 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CHRNB2P17787 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNB2P17787 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNB2P17787 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNB2P17787 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRNB2P17787 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNB2P17787 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.17■□□□□ 0.34
CHRNB2P17787 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.17■□□□□ 0.34
CHRNB2P17787 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRNB2P17787 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRNB2P17787 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms