Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.44□□□□□ -0.1
CTLA4P16410 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.44□□□□□ -0.1
CTLA4P16410 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.44□□□□□ -0.1
CTLA4P16410 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CTLA4P16410 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CTLA4P16410 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.44□□□□□ -0.1
CTLA4P16410 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CTLA4P16410 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CTLA4P16410 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.44□□□□□ -0.1
CTLA4P16410 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.44□□□□□ -0.1
CTLA4P16410 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.44□□□□□ -0.1
CTLA4P16410 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.44□□□□□ -0.1
CTLA4P16410 AC002347.1-201ENST00000569543 541 ntBASIC14.44□□□□□ -0.1
CTLA4P16410 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.44□□□□□ -0.1
CTLA4P16410 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.44□□□□□ -0.1
CTLA4P16410 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.44□□□□□ -0.1
CTLA4P16410 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CTLA4P16410 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.44□□□□□ -0.1
CTLA4P16410 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.44□□□□□ -0.1
CTLA4P16410 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CTLA4P16410 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTLA4P16410 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
CTLA4P16410 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
CTLA4P16410 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 PMS2P7-201ENST00000506558 1336 ntBASIC14.43□□□□□ -0.1
CTLA4P16410 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CTLA4P16410 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CTLA4P16410 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CTLA4P16410 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
CTLA4P16410 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CTLA4P16410 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CTLA4P16410 HAUS4P1-201ENST00000406739 1145 ntBASIC14.43□□□□□ -0.1
CTLA4P16410 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.43□□□□□ -0.1
CTLA4P16410 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.43□□□□□ -0.1
CTLA4P16410 AC112191.1-201ENST00000523689 701 ntBASIC14.43□□□□□ -0.1
CTLA4P16410 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.43□□□□□ -0.1
CTLA4P16410 AL365330.1-201ENST00000607459 531 ntBASIC14.43□□□□□ -0.1
CTLA4P16410 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.43□□□□□ -0.1
CTLA4P16410 FAM197Y3-203ENST00000618346 717 ntBASIC14.43□□□□□ -0.1
CTLA4P16410 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.43□□□□□ -0.1
CTLA4P16410 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CTLA4P16410 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CTLA4P16410 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CTLA4P16410 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.43□□□□□ -0.1
CTLA4P16410 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.43□□□□□ -0.1
CTLA4P16410 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.43□□□□□ -0.1
CTLA4P16410 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.43□□□□□ -0.1
CTLA4P16410 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTLA4P16410 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CTLA4P16410 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.42□□□□□ -0.1
CTLA4P16410 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTLA4P16410 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.42□□□□□ -0.1
CTLA4P16410 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms