Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCL3P10147 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCL3P10147 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCL3P10147 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL3P10147 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL3P10147 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL3P10147 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCL3P10147 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.74□□□□□ -0.05
CCL3P10147 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL3P10147 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL3P10147 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL3P10147 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL3P10147 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.74□□□□□ -0.05
CCL3P10147 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL3P10147 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCL3P10147 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL3P10147 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL3P10147 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.74□□□□□ -0.05
CCL3P10147 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCL3P10147 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCL3P10147 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.74□□□□□ -0.05
CCL3P10147 AC002472.2-201ENST00000442739 958 ntBASIC14.74□□□□□ -0.05
CCL3P10147 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CCL3P10147 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL3P10147 RN7SL618P-201ENST00000477850 296 ntBASIC14.74□□□□□ -0.05
CCL3P10147 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.74□□□□□ -0.05
CCL3P10147 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCL3P10147 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.74□□□□□ -0.05
CCL3P10147 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.74□□□□□ -0.05
CCL3P10147 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CCL3P10147 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
CCL3P10147 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL3P10147 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL3P10147 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCL3P10147 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.74□□□□□ -0.05
CCL3P10147 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.74□□□□□ -0.05
CCL3P10147 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CCL3P10147 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CCL3P10147 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCL3P10147 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCL3P10147 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.74□□□□□ -0.05
CCL3P10147 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CCL3P10147 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.73□□□□□ -0.05
CCL3P10147 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
CCL3P10147 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.73□□□□□ -0.05
CCL3P10147 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.73□□□□□ -0.05
CCL3P10147 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.73□□□□□ -0.05
CCL3P10147 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
CCL3P10147 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
CCL3P10147 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CCL3P10147 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.73□□□□□ -0.05
CCL3P10147 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.73□□□□□ -0.05
CCL3P10147 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.73□□□□□ -0.05
CCL3P10147 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 AC010336.2-201ENST00000564226 506 ntBASIC14.73□□□□□ -0.05
CCL3P10147 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.73□□□□□ -0.05
CCL3P10147 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.73□□□□□ -0.05
CCL3P10147 AC009407.1-201ENST00000568958 598 ntBASIC14.73□□□□□ -0.05
CCL3P10147 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CCL3P10147 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CCL3P10147 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CCL3P10147 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.73□□□□□ -0.05
CCL3P10147 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.73□□□□□ -0.05
CCL3P10147 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCL3P10147 PCDH8P1-201ENST00000428983 2773 ntBASIC14.73□□□□□ -0.05
CCL3P10147 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CCL3P10147 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCL3P10147 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL3P10147 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.72□□□□□ -0.05
CCL3P10147 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCL3P10147 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.72□□□□□ -0.05
CCL3P10147 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CCL3P10147 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CCL3P10147 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL3P10147 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL3P10147 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL3P10147 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.72□□□□□ -0.05
CCL3P10147 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL3P10147 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.72□□□□□ -0.05
CCL3P10147 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL3P10147 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCL3P10147 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms