Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
ERCC1P07992 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.49□□□□□ -0.09
ERCC1P07992 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.49□□□□□ -0.09
ERCC1P07992 RHOQP3-201ENST00000437982 621 ntBASIC14.49□□□□□ -0.09
ERCC1P07992 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.49□□□□□ -0.09
ERCC1P07992 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 PAWRP1-201ENST00000451083 565 ntBASIC14.49□□□□□ -0.09
ERCC1P07992 AC087163.2-201ENST00000457299 853 ntBASIC14.49□□□□□ -0.09
ERCC1P07992 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.49□□□□□ -0.09
ERCC1P07992 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 KRT19P2-202ENST00000557173 1012 ntBASIC14.49□□□□□ -0.09
ERCC1P07992 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.49□□□□□ -0.09
ERCC1P07992 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.49□□□□□ -0.09
ERCC1P07992 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.49□□□□□ -0.09
ERCC1P07992 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.49□□□□□ -0.09
ERCC1P07992 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.49□□□□□ -0.09
ERCC1P07992 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ERCC1P07992 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ERCC1P07992 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ERCC1P07992 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
ERCC1P07992 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC1P07992 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC1P07992 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.48□□□□□ -0.09
ERCC1P07992 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ERCC1P07992 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC1P07992 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
ERCC1P07992 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 IGLL3P-201ENST00000412472 434 ntBASIC14.48□□□□□ -0.09
ERCC1P07992 HTR5BP-201ENST00000430851 1154 ntBASIC14.48□□□□□ -0.09
ERCC1P07992 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.48□□□□□ -0.09
ERCC1P07992 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC1P07992 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.48□□□□□ -0.09
ERCC1P07992 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC1P07992 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC1P07992 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.48□□□□□ -0.09
ERCC1P07992 AL513190.1-201ENST00000621254 727 ntBASIC14.48□□□□□ -0.09
ERCC1P07992 AC134684.3-201ENST00000641758 218 ntBASIC14.48□□□□□ -0.09
ERCC1P07992 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC1P07992 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
ERCC1P07992 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.48□□□□□ -0.09
ERCC1P07992 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
ERCC1P07992 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 AC025580.3-201ENST00000617932 1424 ntBASIC14.48□□□□□ -0.09
ERCC1P07992 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.48□□□□□ -0.09
ERCC1P07992 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERCC1P07992 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC1P07992 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.47□□□□□ -0.09
ERCC1P07992 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC1P07992 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.47□□□□□ -0.09
ERCC1P07992 MST1L-201ENST00000442552 2185 ntBASIC14.47□□□□□ -0.09
ERCC1P07992 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC1P07992 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC1P07992 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC1P07992 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
ERCC1P07992 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC1P07992 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.47□□□□□ -0.09
ERCC1P07992 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC1P07992 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.47□□□□□ -0.09
ERCC1P07992 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC1P07992 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC1P07992 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
ERCC1P07992 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
ERCC1P07992 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC1P07992 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.47□□□□□ -0.09
ERCC1P07992 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.47□□□□□ -0.09
ERCC1P07992 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERCC1P07992 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms